Intrahost SARS-CoV-2 k-mer identification method (iSKIM) for rapid detection of mutations of concern reveals emergence of global mutation patterns

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Despite unprecedented global sequencing and surveillance of SARS-CoV-2, timely identification of the emergence and spread of novel variants of concern (VoCs) remains a challenge. Several million raw genome sequencing runs are now publicly available. We sought to survey these datasets for intrahost v...

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Detalles Bibliográficos
Autores principales: Thommana, Ashley, Shakya, Migun, Gandhi, Jaykumar, Fung, Christian K., Chain, Patrick S.G., Berry, Irina Maljkovic, Conte, Matthew A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2022
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9413717/
https://www.ncbi.nlm.nih.gov/pubmed/36032969
http://dx.doi.org/10.1101/2022.08.16.504117

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