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Bioinformatics Strategies to Identify Shared Molecular Biomarkers That Link Ischemic Stroke and Moyamoya Disease with Glioblastoma

Expanding data suggest that glioblastoma is accountable for the growing prevalence of various forms of stroke formation, such as ischemic stroke and moyamoya disease. However, the underlying deterministic details are still unspecified. Bioinformatics approaches are designed to investigate the relati...

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Autores principales: Islam, Md Khairul, Islam, Md Rakibul, Rahman, Md Habibur, Islam, Md Zahidul, Amin, Md Al, Ahmed, Kazi Rejvee, Rahman, Md Ataur, Moni, Mohammad Ali, Kim, Bonglee
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9413912/
https://www.ncbi.nlm.nih.gov/pubmed/36015199
http://dx.doi.org/10.3390/pharmaceutics14081573
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author Islam, Md Khairul
Islam, Md Rakibul
Rahman, Md Habibur
Islam, Md Zahidul
Amin, Md Al
Ahmed, Kazi Rejvee
Rahman, Md Ataur
Moni, Mohammad Ali
Kim, Bonglee
author_facet Islam, Md Khairul
Islam, Md Rakibul
Rahman, Md Habibur
Islam, Md Zahidul
Amin, Md Al
Ahmed, Kazi Rejvee
Rahman, Md Ataur
Moni, Mohammad Ali
Kim, Bonglee
author_sort Islam, Md Khairul
collection PubMed
description Expanding data suggest that glioblastoma is accountable for the growing prevalence of various forms of stroke formation, such as ischemic stroke and moyamoya disease. However, the underlying deterministic details are still unspecified. Bioinformatics approaches are designed to investigate the relationships between two pathogens as well as fill this study void. Glioblastoma is a form of cancer that typically occurs in the brain or spinal cord and is highly destructive. A stroke occurs when a brain region starts to lose blood circulation and prevents functioning. Moyamoya disorder is a recurrent and recurring arterial disorder of the brain. To begin, adequate gene expression datasets on glioblastoma, ischemic stroke, and moyamoya disease were gathered from various repositories. Then, the association between glioblastoma, ischemic stroke, and moyamoya was established using the existing pipelines. The framework was developed as a generalized workflow to allow for the aggregation of transcriptomic gene expression across specific tissue; Gene Ontology (GO) and biological pathway, as well as the validation of such data, are carried out using enrichment studies such as protein–protein interaction and gold benchmark databases. The results contribute to a more profound knowledge of the disease mechanisms and unveil the projected correlations among the diseases.
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spelling pubmed-94139122022-08-27 Bioinformatics Strategies to Identify Shared Molecular Biomarkers That Link Ischemic Stroke and Moyamoya Disease with Glioblastoma Islam, Md Khairul Islam, Md Rakibul Rahman, Md Habibur Islam, Md Zahidul Amin, Md Al Ahmed, Kazi Rejvee Rahman, Md Ataur Moni, Mohammad Ali Kim, Bonglee Pharmaceutics Article Expanding data suggest that glioblastoma is accountable for the growing prevalence of various forms of stroke formation, such as ischemic stroke and moyamoya disease. However, the underlying deterministic details are still unspecified. Bioinformatics approaches are designed to investigate the relationships between two pathogens as well as fill this study void. Glioblastoma is a form of cancer that typically occurs in the brain or spinal cord and is highly destructive. A stroke occurs when a brain region starts to lose blood circulation and prevents functioning. Moyamoya disorder is a recurrent and recurring arterial disorder of the brain. To begin, adequate gene expression datasets on glioblastoma, ischemic stroke, and moyamoya disease were gathered from various repositories. Then, the association between glioblastoma, ischemic stroke, and moyamoya was established using the existing pipelines. The framework was developed as a generalized workflow to allow for the aggregation of transcriptomic gene expression across specific tissue; Gene Ontology (GO) and biological pathway, as well as the validation of such data, are carried out using enrichment studies such as protein–protein interaction and gold benchmark databases. The results contribute to a more profound knowledge of the disease mechanisms and unveil the projected correlations among the diseases. MDPI 2022-07-28 /pmc/articles/PMC9413912/ /pubmed/36015199 http://dx.doi.org/10.3390/pharmaceutics14081573 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Islam, Md Khairul
Islam, Md Rakibul
Rahman, Md Habibur
Islam, Md Zahidul
Amin, Md Al
Ahmed, Kazi Rejvee
Rahman, Md Ataur
Moni, Mohammad Ali
Kim, Bonglee
Bioinformatics Strategies to Identify Shared Molecular Biomarkers That Link Ischemic Stroke and Moyamoya Disease with Glioblastoma
title Bioinformatics Strategies to Identify Shared Molecular Biomarkers That Link Ischemic Stroke and Moyamoya Disease with Glioblastoma
title_full Bioinformatics Strategies to Identify Shared Molecular Biomarkers That Link Ischemic Stroke and Moyamoya Disease with Glioblastoma
title_fullStr Bioinformatics Strategies to Identify Shared Molecular Biomarkers That Link Ischemic Stroke and Moyamoya Disease with Glioblastoma
title_full_unstemmed Bioinformatics Strategies to Identify Shared Molecular Biomarkers That Link Ischemic Stroke and Moyamoya Disease with Glioblastoma
title_short Bioinformatics Strategies to Identify Shared Molecular Biomarkers That Link Ischemic Stroke and Moyamoya Disease with Glioblastoma
title_sort bioinformatics strategies to identify shared molecular biomarkers that link ischemic stroke and moyamoya disease with glioblastoma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9413912/
https://www.ncbi.nlm.nih.gov/pubmed/36015199
http://dx.doi.org/10.3390/pharmaceutics14081573
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