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Expression Profile Analysis of Circular RNAs in Leishmaniasis
Leishmaniasis is a neglected tropical disease that seriously influences global public health. Among all the parasitic diseases, leishmaniasis is the third most common cause of morbidity after malaria and schistosomiasis. Circular RNAs (circRNAs) are a new type of noncoding RNAs that are involved in...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9415058/ https://www.ncbi.nlm.nih.gov/pubmed/36006268 http://dx.doi.org/10.3390/tropicalmed7080176 |
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author | Li, Zhongqiu Zeng, Wenbo Yang, Yufeng Zhang, Peijun Zhou, Zhengbing Li, Yuanyuan Guo, Yunhai Zhang, Yi |
author_facet | Li, Zhongqiu Zeng, Wenbo Yang, Yufeng Zhang, Peijun Zhou, Zhengbing Li, Yuanyuan Guo, Yunhai Zhang, Yi |
author_sort | Li, Zhongqiu |
collection | PubMed |
description | Leishmaniasis is a neglected tropical disease that seriously influences global public health. Among all the parasitic diseases, leishmaniasis is the third most common cause of morbidity after malaria and schistosomiasis. Circular RNAs (circRNAs) are a new type of noncoding RNAs that are involved in the regulation of biological and developmental processes. However, there is no published research on the function of circRNAs in leishmaniasis. This is the first study to explore the expression profiles of circRNAs in leishmaniasis. GO and KEGG analyses were performed to determine the potential function of the host genes of differentially expressed circRNAs. CircRNA–miRNA–mRNA (ceRNA) regulatory network analysis and protein–protein interaction (PPI) networks were analyzed by R software and the STRING database, respectively. A total of 4664 significant differentially expressed circRNAs were identified and compared to those in control groups; a total of 1931 were up-regulated and 2733 were down-regulated. The host genes of differentially expressed circRNAs were enriched in ubiquitin-mediated proteolysis, endocytosis, the MAPK signaling pathway, renal cell carcinoma, autophagy and the ErbB signaling pathway. Then, five hub genes (BRCA1, CREBBP, EP300, PIK3R1, and CRK) were identified. This study provides new evidence of the change of differentially expressed circRNAs and its potential function in leishmaniasis. These results may provide novel insights and evidence for the diagnosis and treatment of leishmaniasis. |
format | Online Article Text |
id | pubmed-9415058 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-94150582022-08-27 Expression Profile Analysis of Circular RNAs in Leishmaniasis Li, Zhongqiu Zeng, Wenbo Yang, Yufeng Zhang, Peijun Zhou, Zhengbing Li, Yuanyuan Guo, Yunhai Zhang, Yi Trop Med Infect Dis Article Leishmaniasis is a neglected tropical disease that seriously influences global public health. Among all the parasitic diseases, leishmaniasis is the third most common cause of morbidity after malaria and schistosomiasis. Circular RNAs (circRNAs) are a new type of noncoding RNAs that are involved in the regulation of biological and developmental processes. However, there is no published research on the function of circRNAs in leishmaniasis. This is the first study to explore the expression profiles of circRNAs in leishmaniasis. GO and KEGG analyses were performed to determine the potential function of the host genes of differentially expressed circRNAs. CircRNA–miRNA–mRNA (ceRNA) regulatory network analysis and protein–protein interaction (PPI) networks were analyzed by R software and the STRING database, respectively. A total of 4664 significant differentially expressed circRNAs were identified and compared to those in control groups; a total of 1931 were up-regulated and 2733 were down-regulated. The host genes of differentially expressed circRNAs were enriched in ubiquitin-mediated proteolysis, endocytosis, the MAPK signaling pathway, renal cell carcinoma, autophagy and the ErbB signaling pathway. Then, five hub genes (BRCA1, CREBBP, EP300, PIK3R1, and CRK) were identified. This study provides new evidence of the change of differentially expressed circRNAs and its potential function in leishmaniasis. These results may provide novel insights and evidence for the diagnosis and treatment of leishmaniasis. MDPI 2022-08-10 /pmc/articles/PMC9415058/ /pubmed/36006268 http://dx.doi.org/10.3390/tropicalmed7080176 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Li, Zhongqiu Zeng, Wenbo Yang, Yufeng Zhang, Peijun Zhou, Zhengbing Li, Yuanyuan Guo, Yunhai Zhang, Yi Expression Profile Analysis of Circular RNAs in Leishmaniasis |
title | Expression Profile Analysis of Circular RNAs in Leishmaniasis |
title_full | Expression Profile Analysis of Circular RNAs in Leishmaniasis |
title_fullStr | Expression Profile Analysis of Circular RNAs in Leishmaniasis |
title_full_unstemmed | Expression Profile Analysis of Circular RNAs in Leishmaniasis |
title_short | Expression Profile Analysis of Circular RNAs in Leishmaniasis |
title_sort | expression profile analysis of circular rnas in leishmaniasis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9415058/ https://www.ncbi.nlm.nih.gov/pubmed/36006268 http://dx.doi.org/10.3390/tropicalmed7080176 |
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