Cargando…

Expression Profile Analysis of Circular RNAs in Leishmaniasis

Leishmaniasis is a neglected tropical disease that seriously influences global public health. Among all the parasitic diseases, leishmaniasis is the third most common cause of morbidity after malaria and schistosomiasis. Circular RNAs (circRNAs) are a new type of noncoding RNAs that are involved in...

Descripción completa

Detalles Bibliográficos
Autores principales: Li, Zhongqiu, Zeng, Wenbo, Yang, Yufeng, Zhang, Peijun, Zhou, Zhengbing, Li, Yuanyuan, Guo, Yunhai, Zhang, Yi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9415058/
https://www.ncbi.nlm.nih.gov/pubmed/36006268
http://dx.doi.org/10.3390/tropicalmed7080176
_version_ 1784776138884644864
author Li, Zhongqiu
Zeng, Wenbo
Yang, Yufeng
Zhang, Peijun
Zhou, Zhengbing
Li, Yuanyuan
Guo, Yunhai
Zhang, Yi
author_facet Li, Zhongqiu
Zeng, Wenbo
Yang, Yufeng
Zhang, Peijun
Zhou, Zhengbing
Li, Yuanyuan
Guo, Yunhai
Zhang, Yi
author_sort Li, Zhongqiu
collection PubMed
description Leishmaniasis is a neglected tropical disease that seriously influences global public health. Among all the parasitic diseases, leishmaniasis is the third most common cause of morbidity after malaria and schistosomiasis. Circular RNAs (circRNAs) are a new type of noncoding RNAs that are involved in the regulation of biological and developmental processes. However, there is no published research on the function of circRNAs in leishmaniasis. This is the first study to explore the expression profiles of circRNAs in leishmaniasis. GO and KEGG analyses were performed to determine the potential function of the host genes of differentially expressed circRNAs. CircRNA–miRNA–mRNA (ceRNA) regulatory network analysis and protein–protein interaction (PPI) networks were analyzed by R software and the STRING database, respectively. A total of 4664 significant differentially expressed circRNAs were identified and compared to those in control groups; a total of 1931 were up-regulated and 2733 were down-regulated. The host genes of differentially expressed circRNAs were enriched in ubiquitin-mediated proteolysis, endocytosis, the MAPK signaling pathway, renal cell carcinoma, autophagy and the ErbB signaling pathway. Then, five hub genes (BRCA1, CREBBP, EP300, PIK3R1, and CRK) were identified. This study provides new evidence of the change of differentially expressed circRNAs and its potential function in leishmaniasis. These results may provide novel insights and evidence for the diagnosis and treatment of leishmaniasis.
format Online
Article
Text
id pubmed-9415058
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-94150582022-08-27 Expression Profile Analysis of Circular RNAs in Leishmaniasis Li, Zhongqiu Zeng, Wenbo Yang, Yufeng Zhang, Peijun Zhou, Zhengbing Li, Yuanyuan Guo, Yunhai Zhang, Yi Trop Med Infect Dis Article Leishmaniasis is a neglected tropical disease that seriously influences global public health. Among all the parasitic diseases, leishmaniasis is the third most common cause of morbidity after malaria and schistosomiasis. Circular RNAs (circRNAs) are a new type of noncoding RNAs that are involved in the regulation of biological and developmental processes. However, there is no published research on the function of circRNAs in leishmaniasis. This is the first study to explore the expression profiles of circRNAs in leishmaniasis. GO and KEGG analyses were performed to determine the potential function of the host genes of differentially expressed circRNAs. CircRNA–miRNA–mRNA (ceRNA) regulatory network analysis and protein–protein interaction (PPI) networks were analyzed by R software and the STRING database, respectively. A total of 4664 significant differentially expressed circRNAs were identified and compared to those in control groups; a total of 1931 were up-regulated and 2733 were down-regulated. The host genes of differentially expressed circRNAs were enriched in ubiquitin-mediated proteolysis, endocytosis, the MAPK signaling pathway, renal cell carcinoma, autophagy and the ErbB signaling pathway. Then, five hub genes (BRCA1, CREBBP, EP300, PIK3R1, and CRK) were identified. This study provides new evidence of the change of differentially expressed circRNAs and its potential function in leishmaniasis. These results may provide novel insights and evidence for the diagnosis and treatment of leishmaniasis. MDPI 2022-08-10 /pmc/articles/PMC9415058/ /pubmed/36006268 http://dx.doi.org/10.3390/tropicalmed7080176 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Li, Zhongqiu
Zeng, Wenbo
Yang, Yufeng
Zhang, Peijun
Zhou, Zhengbing
Li, Yuanyuan
Guo, Yunhai
Zhang, Yi
Expression Profile Analysis of Circular RNAs in Leishmaniasis
title Expression Profile Analysis of Circular RNAs in Leishmaniasis
title_full Expression Profile Analysis of Circular RNAs in Leishmaniasis
title_fullStr Expression Profile Analysis of Circular RNAs in Leishmaniasis
title_full_unstemmed Expression Profile Analysis of Circular RNAs in Leishmaniasis
title_short Expression Profile Analysis of Circular RNAs in Leishmaniasis
title_sort expression profile analysis of circular rnas in leishmaniasis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9415058/
https://www.ncbi.nlm.nih.gov/pubmed/36006268
http://dx.doi.org/10.3390/tropicalmed7080176
work_keys_str_mv AT lizhongqiu expressionprofileanalysisofcircularrnasinleishmaniasis
AT zengwenbo expressionprofileanalysisofcircularrnasinleishmaniasis
AT yangyufeng expressionprofileanalysisofcircularrnasinleishmaniasis
AT zhangpeijun expressionprofileanalysisofcircularrnasinleishmaniasis
AT zhouzhengbing expressionprofileanalysisofcircularrnasinleishmaniasis
AT liyuanyuan expressionprofileanalysisofcircularrnasinleishmaniasis
AT guoyunhai expressionprofileanalysisofcircularrnasinleishmaniasis
AT zhangyi expressionprofileanalysisofcircularrnasinleishmaniasis