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Enabling Intelligent IoTs for Histopathology Image Analysis Using Convolutional Neural Networks

Medical imaging is an essential data source that has been leveraged worldwide in healthcare systems. In pathology, histopathology images are used for cancer diagnosis, whereas these images are very complex and their analyses by pathologists require large amounts of time and effort. On the other hand...

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Autores principales: Alali, Mohammed H., Roohi, Arman, Angizi, Shaahin, Deogun, Jitender S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9415388/
https://www.ncbi.nlm.nih.gov/pubmed/36014286
http://dx.doi.org/10.3390/mi13081364
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author Alali, Mohammed H.
Roohi, Arman
Angizi, Shaahin
Deogun, Jitender S.
author_facet Alali, Mohammed H.
Roohi, Arman
Angizi, Shaahin
Deogun, Jitender S.
author_sort Alali, Mohammed H.
collection PubMed
description Medical imaging is an essential data source that has been leveraged worldwide in healthcare systems. In pathology, histopathology images are used for cancer diagnosis, whereas these images are very complex and their analyses by pathologists require large amounts of time and effort. On the other hand, although convolutional neural networks (CNNs) have produced near-human results in image processing tasks, their processing time is becoming longer and they need higher computational power. In this paper, we implement a quantized ResNet model on two histopathology image datasets to optimize the inference power consumption. We analyze classification accuracy, energy estimation, and hardware utilization metrics to evaluate our method. First, the original RGB-colored images are utilized for the training phase, and then compression methods such as channel reduction and sparsity are applied. Our results show an accuracy increase of 6% from RGB on 32-bit (baseline) to the optimized representation of sparsity on RGB with a lower bit-width, i.e., <8:8>. For energy estimation on the used CNN model, we found that the energy used in RGB color mode with 32-bit is considerably higher than the other lower bit-width and compressed color modes. Moreover, we show that lower bit-width implementations yield higher resource utilization and a lower memory bottleneck ratio. This work is suitable for inference on energy-limited devices, which are increasingly being used in the Internet of Things (IoT) systems that facilitate healthcare systems.
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spelling pubmed-94153882022-08-27 Enabling Intelligent IoTs for Histopathology Image Analysis Using Convolutional Neural Networks Alali, Mohammed H. Roohi, Arman Angizi, Shaahin Deogun, Jitender S. Micromachines (Basel) Article Medical imaging is an essential data source that has been leveraged worldwide in healthcare systems. In pathology, histopathology images are used for cancer diagnosis, whereas these images are very complex and their analyses by pathologists require large amounts of time and effort. On the other hand, although convolutional neural networks (CNNs) have produced near-human results in image processing tasks, their processing time is becoming longer and they need higher computational power. In this paper, we implement a quantized ResNet model on two histopathology image datasets to optimize the inference power consumption. We analyze classification accuracy, energy estimation, and hardware utilization metrics to evaluate our method. First, the original RGB-colored images are utilized for the training phase, and then compression methods such as channel reduction and sparsity are applied. Our results show an accuracy increase of 6% from RGB on 32-bit (baseline) to the optimized representation of sparsity on RGB with a lower bit-width, i.e., <8:8>. For energy estimation on the used CNN model, we found that the energy used in RGB color mode with 32-bit is considerably higher than the other lower bit-width and compressed color modes. Moreover, we show that lower bit-width implementations yield higher resource utilization and a lower memory bottleneck ratio. This work is suitable for inference on energy-limited devices, which are increasingly being used in the Internet of Things (IoT) systems that facilitate healthcare systems. MDPI 2022-08-22 /pmc/articles/PMC9415388/ /pubmed/36014286 http://dx.doi.org/10.3390/mi13081364 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Alali, Mohammed H.
Roohi, Arman
Angizi, Shaahin
Deogun, Jitender S.
Enabling Intelligent IoTs for Histopathology Image Analysis Using Convolutional Neural Networks
title Enabling Intelligent IoTs for Histopathology Image Analysis Using Convolutional Neural Networks
title_full Enabling Intelligent IoTs for Histopathology Image Analysis Using Convolutional Neural Networks
title_fullStr Enabling Intelligent IoTs for Histopathology Image Analysis Using Convolutional Neural Networks
title_full_unstemmed Enabling Intelligent IoTs for Histopathology Image Analysis Using Convolutional Neural Networks
title_short Enabling Intelligent IoTs for Histopathology Image Analysis Using Convolutional Neural Networks
title_sort enabling intelligent iots for histopathology image analysis using convolutional neural networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9415388/
https://www.ncbi.nlm.nih.gov/pubmed/36014286
http://dx.doi.org/10.3390/mi13081364
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