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Machine Learning for Predicting Hyperglycemic Cases Induced by PD-1/PD-L1 Inhibitors
OBJECTIVE: Immune checkpoint inhibitors, such as programmed death-1/ligand-1 (PD-1/L1), exhibited autoimmune-like disorders, and hyperglycemia was on the top of grade 3 or higher immune-related adverse events. Machine learning is a model from past data for future data prediction. From post-marketing...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9417778/ https://www.ncbi.nlm.nih.gov/pubmed/36032541 http://dx.doi.org/10.1155/2022/6278854 |
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author | Yang, Jincheng Li, Ning Lin, Weilong Shi, Liming Deng, Ming Tong, Qin Yang, Wenjing |
author_facet | Yang, Jincheng Li, Ning Lin, Weilong Shi, Liming Deng, Ming Tong, Qin Yang, Wenjing |
author_sort | Yang, Jincheng |
collection | PubMed |
description | OBJECTIVE: Immune checkpoint inhibitors, such as programmed death-1/ligand-1 (PD-1/L1), exhibited autoimmune-like disorders, and hyperglycemia was on the top of grade 3 or higher immune-related adverse events. Machine learning is a model from past data for future data prediction. From post-marketing monitoring, we aimed to construct a machine learning algorithm to efficiently and rapidly predict hyperglycemic adverse reaction in patients using PD-1/L1 inhibitors. METHODS: In original data downloaded from Food and Drug Administration Adverse Event Reporting System (US FAERS), a multivariate pattern classification of support vector machine (SVM) was used to construct a classifier to separate adverse hyperglycemic reaction patients. With correct core SVM function, a 10-fold 3-time cross validation optimized parameter value composition in model setup with R language software. RESULTS: The SVM prediction model was set up from the number type/number optimization method, as well as the kernel and type of “rbf” and “nu-regression” composition. Two key values (nu and gamma) and case number displayed high adjusted r(2) in curve regressions (nu = 0.5649 × e((− (case/6984))), gamma = 9.005 × 10(−4) × case − 4.877 × 10(−8) × case(2)). This SVM model with computable parameters greatly improved the assessing indexes (accuracy, F1 score, and kappa) as well as coequal sensitivity and the area under the curve (AUC). CONCLUSION: We constructed an effective machine learning model based on compositions of exact kernels and computable parameters; the SVM prediction model can noninvasively and precisely predict hyperglycemic adverse drug reaction (ADR) in patients treated with PD-1/L1 inhibitors, which could greatly help clinical practitioners to identify high-risk patients and perform preventive measurements in time. Besides, this model setup process provided an analytic conception for promotion to other ADR prediction, such ADR information is vital for outcome improvement by identifying high-risk patients, and this machine learning algorithm can eventually add value to clinical decision making. |
format | Online Article Text |
id | pubmed-9417778 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-94177782022-08-27 Machine Learning for Predicting Hyperglycemic Cases Induced by PD-1/PD-L1 Inhibitors Yang, Jincheng Li, Ning Lin, Weilong Shi, Liming Deng, Ming Tong, Qin Yang, Wenjing J Healthc Eng Research Article OBJECTIVE: Immune checkpoint inhibitors, such as programmed death-1/ligand-1 (PD-1/L1), exhibited autoimmune-like disorders, and hyperglycemia was on the top of grade 3 or higher immune-related adverse events. Machine learning is a model from past data for future data prediction. From post-marketing monitoring, we aimed to construct a machine learning algorithm to efficiently and rapidly predict hyperglycemic adverse reaction in patients using PD-1/L1 inhibitors. METHODS: In original data downloaded from Food and Drug Administration Adverse Event Reporting System (US FAERS), a multivariate pattern classification of support vector machine (SVM) was used to construct a classifier to separate adverse hyperglycemic reaction patients. With correct core SVM function, a 10-fold 3-time cross validation optimized parameter value composition in model setup with R language software. RESULTS: The SVM prediction model was set up from the number type/number optimization method, as well as the kernel and type of “rbf” and “nu-regression” composition. Two key values (nu and gamma) and case number displayed high adjusted r(2) in curve regressions (nu = 0.5649 × e((− (case/6984))), gamma = 9.005 × 10(−4) × case − 4.877 × 10(−8) × case(2)). This SVM model with computable parameters greatly improved the assessing indexes (accuracy, F1 score, and kappa) as well as coequal sensitivity and the area under the curve (AUC). CONCLUSION: We constructed an effective machine learning model based on compositions of exact kernels and computable parameters; the SVM prediction model can noninvasively and precisely predict hyperglycemic adverse drug reaction (ADR) in patients treated with PD-1/L1 inhibitors, which could greatly help clinical practitioners to identify high-risk patients and perform preventive measurements in time. Besides, this model setup process provided an analytic conception for promotion to other ADR prediction, such ADR information is vital for outcome improvement by identifying high-risk patients, and this machine learning algorithm can eventually add value to clinical decision making. Hindawi 2022-08-19 /pmc/articles/PMC9417778/ /pubmed/36032541 http://dx.doi.org/10.1155/2022/6278854 Text en Copyright © 2022 Jincheng Yang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Yang, Jincheng Li, Ning Lin, Weilong Shi, Liming Deng, Ming Tong, Qin Yang, Wenjing Machine Learning for Predicting Hyperglycemic Cases Induced by PD-1/PD-L1 Inhibitors |
title | Machine Learning for Predicting Hyperglycemic Cases Induced by PD-1/PD-L1 Inhibitors |
title_full | Machine Learning for Predicting Hyperglycemic Cases Induced by PD-1/PD-L1 Inhibitors |
title_fullStr | Machine Learning for Predicting Hyperglycemic Cases Induced by PD-1/PD-L1 Inhibitors |
title_full_unstemmed | Machine Learning for Predicting Hyperglycemic Cases Induced by PD-1/PD-L1 Inhibitors |
title_short | Machine Learning for Predicting Hyperglycemic Cases Induced by PD-1/PD-L1 Inhibitors |
title_sort | machine learning for predicting hyperglycemic cases induced by pd-1/pd-l1 inhibitors |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9417778/ https://www.ncbi.nlm.nih.gov/pubmed/36032541 http://dx.doi.org/10.1155/2022/6278854 |
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