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Wildfire-dependent changes in soil microbiome diversity and function

Forest soil microbiomes have crucial roles in carbon storage, biogeochemical cycling and rhizosphere processes. Wildfire season length, and the frequency and size of severe fires have increased owing to climate change. Fires affect ecosystem recovery and modify soil microbiomes and microbially media...

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Autores principales: Nelson, Amelia R., Narrowe, Adrienne B., Rhoades, Charles C., Fegel, Timothy S., Daly, Rebecca A., Roth, Holly K., Chu, Rosalie K., Amundson, Kaela K., Young, Robert B., Steindorff, Andrei S., Mondo, Stephen J., Grigoriev, Igor V., Salamov, Asaf, Borch, Thomas, Wilkins, Michael J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9418001/
https://www.ncbi.nlm.nih.gov/pubmed/36008619
http://dx.doi.org/10.1038/s41564-022-01203-y
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author Nelson, Amelia R.
Narrowe, Adrienne B.
Rhoades, Charles C.
Fegel, Timothy S.
Daly, Rebecca A.
Roth, Holly K.
Chu, Rosalie K.
Amundson, Kaela K.
Young, Robert B.
Steindorff, Andrei S.
Mondo, Stephen J.
Grigoriev, Igor V.
Salamov, Asaf
Borch, Thomas
Wilkins, Michael J.
author_facet Nelson, Amelia R.
Narrowe, Adrienne B.
Rhoades, Charles C.
Fegel, Timothy S.
Daly, Rebecca A.
Roth, Holly K.
Chu, Rosalie K.
Amundson, Kaela K.
Young, Robert B.
Steindorff, Andrei S.
Mondo, Stephen J.
Grigoriev, Igor V.
Salamov, Asaf
Borch, Thomas
Wilkins, Michael J.
author_sort Nelson, Amelia R.
collection PubMed
description Forest soil microbiomes have crucial roles in carbon storage, biogeochemical cycling and rhizosphere processes. Wildfire season length, and the frequency and size of severe fires have increased owing to climate change. Fires affect ecosystem recovery and modify soil microbiomes and microbially mediated biogeochemical processes. To study wildfire-dependent changes in soil microbiomes, we characterized functional shifts in the soil microbiota (bacteria, fungi and viruses) across burn severity gradients (low, moderate and high severity) 1 yr post fire in coniferous forests in Colorado and Wyoming, USA. We found severity-dependent increases of Actinobacteria encoding genes for heat resistance, fast growth, and pyrogenic carbon utilization that might enhance post-fire survival. We report that increased burn severity led to the loss of ectomycorrhizal fungi and less tolerant microbial taxa. Viruses remained active in post-fire soils and probably influenced carbon cycling and biogeochemistry via turnover of biomass and ecosystem-relevant auxiliary metabolic genes. Our genome-resolved analyses link post-fire soil microbial taxonomy to functions and reveal the complexity of post-fire soil microbiome activity.
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spelling pubmed-94180012022-08-28 Wildfire-dependent changes in soil microbiome diversity and function Nelson, Amelia R. Narrowe, Adrienne B. Rhoades, Charles C. Fegel, Timothy S. Daly, Rebecca A. Roth, Holly K. Chu, Rosalie K. Amundson, Kaela K. Young, Robert B. Steindorff, Andrei S. Mondo, Stephen J. Grigoriev, Igor V. Salamov, Asaf Borch, Thomas Wilkins, Michael J. Nat Microbiol Article Forest soil microbiomes have crucial roles in carbon storage, biogeochemical cycling and rhizosphere processes. Wildfire season length, and the frequency and size of severe fires have increased owing to climate change. Fires affect ecosystem recovery and modify soil microbiomes and microbially mediated biogeochemical processes. To study wildfire-dependent changes in soil microbiomes, we characterized functional shifts in the soil microbiota (bacteria, fungi and viruses) across burn severity gradients (low, moderate and high severity) 1 yr post fire in coniferous forests in Colorado and Wyoming, USA. We found severity-dependent increases of Actinobacteria encoding genes for heat resistance, fast growth, and pyrogenic carbon utilization that might enhance post-fire survival. We report that increased burn severity led to the loss of ectomycorrhizal fungi and less tolerant microbial taxa. Viruses remained active in post-fire soils and probably influenced carbon cycling and biogeochemistry via turnover of biomass and ecosystem-relevant auxiliary metabolic genes. Our genome-resolved analyses link post-fire soil microbial taxonomy to functions and reveal the complexity of post-fire soil microbiome activity. Nature Publishing Group UK 2022-08-25 2022 /pmc/articles/PMC9418001/ /pubmed/36008619 http://dx.doi.org/10.1038/s41564-022-01203-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Nelson, Amelia R.
Narrowe, Adrienne B.
Rhoades, Charles C.
Fegel, Timothy S.
Daly, Rebecca A.
Roth, Holly K.
Chu, Rosalie K.
Amundson, Kaela K.
Young, Robert B.
Steindorff, Andrei S.
Mondo, Stephen J.
Grigoriev, Igor V.
Salamov, Asaf
Borch, Thomas
Wilkins, Michael J.
Wildfire-dependent changes in soil microbiome diversity and function
title Wildfire-dependent changes in soil microbiome diversity and function
title_full Wildfire-dependent changes in soil microbiome diversity and function
title_fullStr Wildfire-dependent changes in soil microbiome diversity and function
title_full_unstemmed Wildfire-dependent changes in soil microbiome diversity and function
title_short Wildfire-dependent changes in soil microbiome diversity and function
title_sort wildfire-dependent changes in soil microbiome diversity and function
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9418001/
https://www.ncbi.nlm.nih.gov/pubmed/36008619
http://dx.doi.org/10.1038/s41564-022-01203-y
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