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RSDB: A rare skin disease database to link drugs with potential drug targets for rare skin diseases

Rare skin diseases include more than 800 diseases affecting more than 6.8 million patients worldwide. However, only 100 drugs have been developed for treating rare skin diseases in the past 38 years. To investigate potential treatments through drug repurposing for rare skin diseases, it is necessary...

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Autores principales: Kuo, Tien-Chueh, Wang, Pei-Hua, Wang, Yu-Ke, Chang, Chia-I., Chang, Ching-Yao, Tseng, Yufeng Jane
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9418253/
https://www.ncbi.nlm.nih.gov/pubmed/36028515
http://dx.doi.org/10.1038/s41597-022-01654-2
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author Kuo, Tien-Chueh
Wang, Pei-Hua
Wang, Yu-Ke
Chang, Chia-I.
Chang, Ching-Yao
Tseng, Yufeng Jane
author_facet Kuo, Tien-Chueh
Wang, Pei-Hua
Wang, Yu-Ke
Chang, Chia-I.
Chang, Ching-Yao
Tseng, Yufeng Jane
author_sort Kuo, Tien-Chueh
collection PubMed
description Rare skin diseases include more than 800 diseases affecting more than 6.8 million patients worldwide. However, only 100 drugs have been developed for treating rare skin diseases in the past 38 years. To investigate potential treatments through drug repurposing for rare skin diseases, it is necessary to have a well-organized database to link all known disease causes, mechanisms, and related information to accelerate the process. Drug repurposing provides less expensive and faster potential options to develop treatments for known diseases. In this work, we designed and constructed a rare skin disease database (RSDB) as a disease-centered information depository to facilitate repurposing drug candidates for rare skin diseases. We collected and integrated associated genes, chemicals, and phenotypes into a network connected by pairwise relationships between different components for rare skin diseases. The RSDB covers 891 rare skin diseases defined by the Orphanet and GARD databases. The organized network for each rare skin disease comprises associated genes, phenotypes, and chemicals with the corresponding connections. The RSDB is available at https://rsdb.cmdm.tw.
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spelling pubmed-94182532022-08-28 RSDB: A rare skin disease database to link drugs with potential drug targets for rare skin diseases Kuo, Tien-Chueh Wang, Pei-Hua Wang, Yu-Ke Chang, Chia-I. Chang, Ching-Yao Tseng, Yufeng Jane Sci Data Data Descriptor Rare skin diseases include more than 800 diseases affecting more than 6.8 million patients worldwide. However, only 100 drugs have been developed for treating rare skin diseases in the past 38 years. To investigate potential treatments through drug repurposing for rare skin diseases, it is necessary to have a well-organized database to link all known disease causes, mechanisms, and related information to accelerate the process. Drug repurposing provides less expensive and faster potential options to develop treatments for known diseases. In this work, we designed and constructed a rare skin disease database (RSDB) as a disease-centered information depository to facilitate repurposing drug candidates for rare skin diseases. We collected and integrated associated genes, chemicals, and phenotypes into a network connected by pairwise relationships between different components for rare skin diseases. The RSDB covers 891 rare skin diseases defined by the Orphanet and GARD databases. The organized network for each rare skin disease comprises associated genes, phenotypes, and chemicals with the corresponding connections. The RSDB is available at https://rsdb.cmdm.tw. Nature Publishing Group UK 2022-08-26 /pmc/articles/PMC9418253/ /pubmed/36028515 http://dx.doi.org/10.1038/s41597-022-01654-2 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Data Descriptor
Kuo, Tien-Chueh
Wang, Pei-Hua
Wang, Yu-Ke
Chang, Chia-I.
Chang, Ching-Yao
Tseng, Yufeng Jane
RSDB: A rare skin disease database to link drugs with potential drug targets for rare skin diseases
title RSDB: A rare skin disease database to link drugs with potential drug targets for rare skin diseases
title_full RSDB: A rare skin disease database to link drugs with potential drug targets for rare skin diseases
title_fullStr RSDB: A rare skin disease database to link drugs with potential drug targets for rare skin diseases
title_full_unstemmed RSDB: A rare skin disease database to link drugs with potential drug targets for rare skin diseases
title_short RSDB: A rare skin disease database to link drugs with potential drug targets for rare skin diseases
title_sort rsdb: a rare skin disease database to link drugs with potential drug targets for rare skin diseases
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9418253/
https://www.ncbi.nlm.nih.gov/pubmed/36028515
http://dx.doi.org/10.1038/s41597-022-01654-2
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