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An ultrasensitive nanofiber-based assay for enzymatic hydrolysis and deep-sea microbial degradation of cellulose

Substrates for enzymatic reactions, such as cellulose and chitin, are often insoluble in water. The enzymatic degradation of these abundant organic polymers plays a dominant role in the global carbon cycle and has tremendous technological importance in the production of bio-based chemicals. In addit...

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Detalles Bibliográficos
Autores principales: Tsudome, Mikiko, Tachioka, Mikako, Miyazaki, Masayuki, Uchimura, Kohsuke, Tsuda, Miwako, Takaki, Yoshihiro, Deguchi, Shigeru
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9418596/
https://www.ncbi.nlm.nih.gov/pubmed/36039358
http://dx.doi.org/10.1016/j.isci.2022.104732
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author Tsudome, Mikiko
Tachioka, Mikako
Miyazaki, Masayuki
Uchimura, Kohsuke
Tsuda, Miwako
Takaki, Yoshihiro
Deguchi, Shigeru
author_facet Tsudome, Mikiko
Tachioka, Mikako
Miyazaki, Masayuki
Uchimura, Kohsuke
Tsuda, Miwako
Takaki, Yoshihiro
Deguchi, Shigeru
author_sort Tsudome, Mikiko
collection PubMed
description Substrates for enzymatic reactions, such as cellulose and chitin, are often insoluble in water. The enzymatic degradation of these abundant organic polymers plays a dominant role in the global carbon cycle and has tremendous technological importance in the production of bio-based chemicals. In addition, biodegradation of plastics is gaining wide attention. However, despite the significance, assaying these degradation reactions remains technically challenging owing to the low reaction rate, because only the surface of the substrate is accessible to the enzymes. We developed a nanofiber-based assay for the enzymatic hydrolysis of cellulose. This assay facilitated the quantification of the enzymatic hydrolysis of <1 ng crystalline cellulose. Utilization of the assay for the functional screening of cellulolytic microorganisms revealed an unprecedented genetic diversity underlying the production of deep-sea cellulase. This study reiterates that interdisciplinary efforts, such as from nanotechnology to microbiology, are critical for solving sustainability challenges.
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spelling pubmed-94185962022-08-28 An ultrasensitive nanofiber-based assay for enzymatic hydrolysis and deep-sea microbial degradation of cellulose Tsudome, Mikiko Tachioka, Mikako Miyazaki, Masayuki Uchimura, Kohsuke Tsuda, Miwako Takaki, Yoshihiro Deguchi, Shigeru iScience Article Substrates for enzymatic reactions, such as cellulose and chitin, are often insoluble in water. The enzymatic degradation of these abundant organic polymers plays a dominant role in the global carbon cycle and has tremendous technological importance in the production of bio-based chemicals. In addition, biodegradation of plastics is gaining wide attention. However, despite the significance, assaying these degradation reactions remains technically challenging owing to the low reaction rate, because only the surface of the substrate is accessible to the enzymes. We developed a nanofiber-based assay for the enzymatic hydrolysis of cellulose. This assay facilitated the quantification of the enzymatic hydrolysis of <1 ng crystalline cellulose. Utilization of the assay for the functional screening of cellulolytic microorganisms revealed an unprecedented genetic diversity underlying the production of deep-sea cellulase. This study reiterates that interdisciplinary efforts, such as from nanotechnology to microbiology, are critical for solving sustainability challenges. Elsevier 2022-07-30 /pmc/articles/PMC9418596/ /pubmed/36039358 http://dx.doi.org/10.1016/j.isci.2022.104732 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Tsudome, Mikiko
Tachioka, Mikako
Miyazaki, Masayuki
Uchimura, Kohsuke
Tsuda, Miwako
Takaki, Yoshihiro
Deguchi, Shigeru
An ultrasensitive nanofiber-based assay for enzymatic hydrolysis and deep-sea microbial degradation of cellulose
title An ultrasensitive nanofiber-based assay for enzymatic hydrolysis and deep-sea microbial degradation of cellulose
title_full An ultrasensitive nanofiber-based assay for enzymatic hydrolysis and deep-sea microbial degradation of cellulose
title_fullStr An ultrasensitive nanofiber-based assay for enzymatic hydrolysis and deep-sea microbial degradation of cellulose
title_full_unstemmed An ultrasensitive nanofiber-based assay for enzymatic hydrolysis and deep-sea microbial degradation of cellulose
title_short An ultrasensitive nanofiber-based assay for enzymatic hydrolysis and deep-sea microbial degradation of cellulose
title_sort ultrasensitive nanofiber-based assay for enzymatic hydrolysis and deep-sea microbial degradation of cellulose
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9418596/
https://www.ncbi.nlm.nih.gov/pubmed/36039358
http://dx.doi.org/10.1016/j.isci.2022.104732
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