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CHAP-child: an open source method for estimating sit-to-stand transitions and sedentary bout patterns from hip accelerometers among children

BACKGROUND: Hip-worn accelerometer cut-points have poor validity for assessing children’s sedentary time, which may partly explain the equivocal health associations shown in prior research. Improved processing/classification methods for these monitors would enrich the evidence base and inform the de...

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Autores principales: Carlson, Jordan A., Ridgers, Nicola D., Nakandala, Supun, Zablocki, Rong, Tuz-Zahra, Fatima, Bellettiere, John, Hibbing, Paul R., Steel, Chelsea, Jankowska, Marta M., Rosenberg, Dori E., Greenwood-Hickman, Mikael Anne, Zou, Jingjing, LaCroix, Andrea Z., Kumar, Arun, Natarajan, Loki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9419346/
https://www.ncbi.nlm.nih.gov/pubmed/36028890
http://dx.doi.org/10.1186/s12966-022-01349-2
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author Carlson, Jordan A.
Ridgers, Nicola D.
Nakandala, Supun
Zablocki, Rong
Tuz-Zahra, Fatima
Bellettiere, John
Hibbing, Paul R.
Steel, Chelsea
Jankowska, Marta M.
Rosenberg, Dori E.
Greenwood-Hickman, Mikael Anne
Zou, Jingjing
LaCroix, Andrea Z.
Kumar, Arun
Natarajan, Loki
author_facet Carlson, Jordan A.
Ridgers, Nicola D.
Nakandala, Supun
Zablocki, Rong
Tuz-Zahra, Fatima
Bellettiere, John
Hibbing, Paul R.
Steel, Chelsea
Jankowska, Marta M.
Rosenberg, Dori E.
Greenwood-Hickman, Mikael Anne
Zou, Jingjing
LaCroix, Andrea Z.
Kumar, Arun
Natarajan, Loki
author_sort Carlson, Jordan A.
collection PubMed
description BACKGROUND: Hip-worn accelerometer cut-points have poor validity for assessing children’s sedentary time, which may partly explain the equivocal health associations shown in prior research. Improved processing/classification methods for these monitors would enrich the evidence base and inform the development of more effective public health guidelines. The present study aimed to develop and evaluate a novel computational method (CHAP-child) for classifying sedentary time from hip-worn accelerometer data. METHODS: Participants were 278, 8–11-year-olds recruited from nine primary schools in Melbourne, Australia with differing socioeconomic status. Participants concurrently wore a thigh-worn activPAL (ground truth) and hip-worn ActiGraph (test measure) during up to 4 seasonal assessment periods, each lasting up to 8 days. activPAL data were used to train and evaluate the CHAP-child deep learning model to classify each 10-s epoch of raw ActiGraph acceleration data as sitting or non-sitting, creating comparable information from the two monitors. CHAP-child was evaluated alongside the current practice 100 counts per minute (cpm) method for hip-worn ActiGraph monitors. Performance was tested for each 10-s epoch and for participant-season level sedentary time and bout variables (e.g., mean bout duration). RESULTS: Across participant-seasons, CHAP-child correctly classified each epoch as sitting or non-sitting relative to activPAL, with mean balanced accuracy of 87.6% (SD = 5.3%). Sit-to-stand transitions were correctly classified with mean sensitivity of 76.3% (SD = 8.3). For most participant-season level variables, CHAP-child estimates were within ± 11% (mean absolute percent error [MAPE]) of activPAL, and correlations between CHAP-child and activPAL were generally very large (> 0.80). For the current practice 100 cpm method, most MAPEs were greater than ± 30% and most correlations were small or moderate (≤ 0.60) relative to activPAL. CONCLUSIONS: There was strong support for the concurrent validity of the CHAP-child classification method, which allows researchers to derive activPAL-equivalent measures of sedentary time, sit-to-stand transitions, and sedentary bout patterns from hip-worn triaxial ActiGraph data. Applying CHAP-child to existing datasets may provide greater insights into the potential impacts and influences of sedentary time in children.
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spelling pubmed-94193462022-08-28 CHAP-child: an open source method for estimating sit-to-stand transitions and sedentary bout patterns from hip accelerometers among children Carlson, Jordan A. Ridgers, Nicola D. Nakandala, Supun Zablocki, Rong Tuz-Zahra, Fatima Bellettiere, John Hibbing, Paul R. Steel, Chelsea Jankowska, Marta M. Rosenberg, Dori E. Greenwood-Hickman, Mikael Anne Zou, Jingjing LaCroix, Andrea Z. Kumar, Arun Natarajan, Loki Int J Behav Nutr Phys Act Methodology BACKGROUND: Hip-worn accelerometer cut-points have poor validity for assessing children’s sedentary time, which may partly explain the equivocal health associations shown in prior research. Improved processing/classification methods for these monitors would enrich the evidence base and inform the development of more effective public health guidelines. The present study aimed to develop and evaluate a novel computational method (CHAP-child) for classifying sedentary time from hip-worn accelerometer data. METHODS: Participants were 278, 8–11-year-olds recruited from nine primary schools in Melbourne, Australia with differing socioeconomic status. Participants concurrently wore a thigh-worn activPAL (ground truth) and hip-worn ActiGraph (test measure) during up to 4 seasonal assessment periods, each lasting up to 8 days. activPAL data were used to train and evaluate the CHAP-child deep learning model to classify each 10-s epoch of raw ActiGraph acceleration data as sitting or non-sitting, creating comparable information from the two monitors. CHAP-child was evaluated alongside the current practice 100 counts per minute (cpm) method for hip-worn ActiGraph monitors. Performance was tested for each 10-s epoch and for participant-season level sedentary time and bout variables (e.g., mean bout duration). RESULTS: Across participant-seasons, CHAP-child correctly classified each epoch as sitting or non-sitting relative to activPAL, with mean balanced accuracy of 87.6% (SD = 5.3%). Sit-to-stand transitions were correctly classified with mean sensitivity of 76.3% (SD = 8.3). For most participant-season level variables, CHAP-child estimates were within ± 11% (mean absolute percent error [MAPE]) of activPAL, and correlations between CHAP-child and activPAL were generally very large (> 0.80). For the current practice 100 cpm method, most MAPEs were greater than ± 30% and most correlations were small or moderate (≤ 0.60) relative to activPAL. CONCLUSIONS: There was strong support for the concurrent validity of the CHAP-child classification method, which allows researchers to derive activPAL-equivalent measures of sedentary time, sit-to-stand transitions, and sedentary bout patterns from hip-worn triaxial ActiGraph data. Applying CHAP-child to existing datasets may provide greater insights into the potential impacts and influences of sedentary time in children. BioMed Central 2022-08-26 /pmc/articles/PMC9419346/ /pubmed/36028890 http://dx.doi.org/10.1186/s12966-022-01349-2 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Methodology
Carlson, Jordan A.
Ridgers, Nicola D.
Nakandala, Supun
Zablocki, Rong
Tuz-Zahra, Fatima
Bellettiere, John
Hibbing, Paul R.
Steel, Chelsea
Jankowska, Marta M.
Rosenberg, Dori E.
Greenwood-Hickman, Mikael Anne
Zou, Jingjing
LaCroix, Andrea Z.
Kumar, Arun
Natarajan, Loki
CHAP-child: an open source method for estimating sit-to-stand transitions and sedentary bout patterns from hip accelerometers among children
title CHAP-child: an open source method for estimating sit-to-stand transitions and sedentary bout patterns from hip accelerometers among children
title_full CHAP-child: an open source method for estimating sit-to-stand transitions and sedentary bout patterns from hip accelerometers among children
title_fullStr CHAP-child: an open source method for estimating sit-to-stand transitions and sedentary bout patterns from hip accelerometers among children
title_full_unstemmed CHAP-child: an open source method for estimating sit-to-stand transitions and sedentary bout patterns from hip accelerometers among children
title_short CHAP-child: an open source method for estimating sit-to-stand transitions and sedentary bout patterns from hip accelerometers among children
title_sort chap-child: an open source method for estimating sit-to-stand transitions and sedentary bout patterns from hip accelerometers among children
topic Methodology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9419346/
https://www.ncbi.nlm.nih.gov/pubmed/36028890
http://dx.doi.org/10.1186/s12966-022-01349-2
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