Cargando…

Surveillance of SARS-CoV-2 in nine neighborhood sewersheds in Detroit Tri-County area, United States: Assessing per capita SARS-CoV-2 estimations and COVID-19 incidence

Wastewater-based epidemiology (WBE) has been suggested as a useful tool to predict the emergence and investigate the extent of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). In this study, we screened appropriate population biomarkers for wastewater SARS-CoV-2 normalization and compar...

Descripción completa

Detalles Bibliográficos
Autores principales: Li, Yabing, Miyani, Brijen, Zhao, Liang, Spooner, Maddie, Gentry, Zach, Zou, Yangyang, Rhodes, Geoff, Li, Hui, Kaye, Andrew, Norton, John, Xagoraraki, Irene
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9419442/
https://www.ncbi.nlm.nih.gov/pubmed/36041621
http://dx.doi.org/10.1016/j.scitotenv.2022.158350
_version_ 1784777176594251776
author Li, Yabing
Miyani, Brijen
Zhao, Liang
Spooner, Maddie
Gentry, Zach
Zou, Yangyang
Rhodes, Geoff
Li, Hui
Kaye, Andrew
Norton, John
Xagoraraki, Irene
author_facet Li, Yabing
Miyani, Brijen
Zhao, Liang
Spooner, Maddie
Gentry, Zach
Zou, Yangyang
Rhodes, Geoff
Li, Hui
Kaye, Andrew
Norton, John
Xagoraraki, Irene
author_sort Li, Yabing
collection PubMed
description Wastewater-based epidemiology (WBE) has been suggested as a useful tool to predict the emergence and investigate the extent of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). In this study, we screened appropriate population biomarkers for wastewater SARS-CoV-2 normalization and compared the normalized SARS-CoV-2 values across locations with different demographic characteristics in southeastern Michigan. Wastewater samples were collected between December 2020 and October 2021 from nine neighborhood sewersheds in the Detroit Tri-County area. Using reverse transcriptase droplet digital polymerase chain reaction (RT-ddPCR), concentrations of N1 and N2 genes in the studied sites were quantified, with N1 values ranging from 1.92 × 10(2) genomic copies/L to 6.87 × 10(3) gc/L and N2 values ranging from 1.91 × 10(2) gc/L to 6.45 × 10(3) gc/L. The strongest correlations were observed with between cumulative COVID-19 cases per capita (referred as COVID-19 incidences thereafter), and SARS-CoV-2 concentrations normalized by total Kjeldahl nitrogen (TKN), creatinine, 5-hydroxyindoleacetic acid (5-HIAA) and xanthine when correlating the per capita SARS-CoV-2 and COVID-19 incidences. When SARS-CoV-2 concentrations in wastewater were normalized and compared with COVID-19 incidences, the differences between neighborhoods of varying demographics were reduced as compared to differences observed when comparing non-normalized SARS-CoV-2 with COVID-19 cases. This indicates when studying the disease burden in communities of different demographics, accurate per capita estimation is of great importance. The study suggests that monitoring selected water quality parameters or biomarkers, along with RNA concentrations in wastewater, will allow adequate data normalization for spatial comparisons, especially in areas where detailed sanitary sewage flows and contributing populations in the catchment areas are not available. This opens the possibility of using WBE to assess community infections in rural areas or the developing world where the contributing population of a sample could be unknown.
format Online
Article
Text
id pubmed-9419442
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Elsevier B.V.
record_format MEDLINE/PubMed
spelling pubmed-94194422022-08-30 Surveillance of SARS-CoV-2 in nine neighborhood sewersheds in Detroit Tri-County area, United States: Assessing per capita SARS-CoV-2 estimations and COVID-19 incidence Li, Yabing Miyani, Brijen Zhao, Liang Spooner, Maddie Gentry, Zach Zou, Yangyang Rhodes, Geoff Li, Hui Kaye, Andrew Norton, John Xagoraraki, Irene Sci Total Environ Article Wastewater-based epidemiology (WBE) has been suggested as a useful tool to predict the emergence and investigate the extent of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). In this study, we screened appropriate population biomarkers for wastewater SARS-CoV-2 normalization and compared the normalized SARS-CoV-2 values across locations with different demographic characteristics in southeastern Michigan. Wastewater samples were collected between December 2020 and October 2021 from nine neighborhood sewersheds in the Detroit Tri-County area. Using reverse transcriptase droplet digital polymerase chain reaction (RT-ddPCR), concentrations of N1 and N2 genes in the studied sites were quantified, with N1 values ranging from 1.92 × 10(2) genomic copies/L to 6.87 × 10(3) gc/L and N2 values ranging from 1.91 × 10(2) gc/L to 6.45 × 10(3) gc/L. The strongest correlations were observed with between cumulative COVID-19 cases per capita (referred as COVID-19 incidences thereafter), and SARS-CoV-2 concentrations normalized by total Kjeldahl nitrogen (TKN), creatinine, 5-hydroxyindoleacetic acid (5-HIAA) and xanthine when correlating the per capita SARS-CoV-2 and COVID-19 incidences. When SARS-CoV-2 concentrations in wastewater were normalized and compared with COVID-19 incidences, the differences between neighborhoods of varying demographics were reduced as compared to differences observed when comparing non-normalized SARS-CoV-2 with COVID-19 cases. This indicates when studying the disease burden in communities of different demographics, accurate per capita estimation is of great importance. The study suggests that monitoring selected water quality parameters or biomarkers, along with RNA concentrations in wastewater, will allow adequate data normalization for spatial comparisons, especially in areas where detailed sanitary sewage flows and contributing populations in the catchment areas are not available. This opens the possibility of using WBE to assess community infections in rural areas or the developing world where the contributing population of a sample could be unknown. Elsevier B.V. 2022-12-10 2022-08-27 /pmc/articles/PMC9419442/ /pubmed/36041621 http://dx.doi.org/10.1016/j.scitotenv.2022.158350 Text en © 2022 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Li, Yabing
Miyani, Brijen
Zhao, Liang
Spooner, Maddie
Gentry, Zach
Zou, Yangyang
Rhodes, Geoff
Li, Hui
Kaye, Andrew
Norton, John
Xagoraraki, Irene
Surveillance of SARS-CoV-2 in nine neighborhood sewersheds in Detroit Tri-County area, United States: Assessing per capita SARS-CoV-2 estimations and COVID-19 incidence
title Surveillance of SARS-CoV-2 in nine neighborhood sewersheds in Detroit Tri-County area, United States: Assessing per capita SARS-CoV-2 estimations and COVID-19 incidence
title_full Surveillance of SARS-CoV-2 in nine neighborhood sewersheds in Detroit Tri-County area, United States: Assessing per capita SARS-CoV-2 estimations and COVID-19 incidence
title_fullStr Surveillance of SARS-CoV-2 in nine neighborhood sewersheds in Detroit Tri-County area, United States: Assessing per capita SARS-CoV-2 estimations and COVID-19 incidence
title_full_unstemmed Surveillance of SARS-CoV-2 in nine neighborhood sewersheds in Detroit Tri-County area, United States: Assessing per capita SARS-CoV-2 estimations and COVID-19 incidence
title_short Surveillance of SARS-CoV-2 in nine neighborhood sewersheds in Detroit Tri-County area, United States: Assessing per capita SARS-CoV-2 estimations and COVID-19 incidence
title_sort surveillance of sars-cov-2 in nine neighborhood sewersheds in detroit tri-county area, united states: assessing per capita sars-cov-2 estimations and covid-19 incidence
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9419442/
https://www.ncbi.nlm.nih.gov/pubmed/36041621
http://dx.doi.org/10.1016/j.scitotenv.2022.158350
work_keys_str_mv AT liyabing surveillanceofsarscov2innineneighborhoodsewershedsindetroittricountyareaunitedstatesassessingpercapitasarscov2estimationsandcovid19incidence
AT miyanibrijen surveillanceofsarscov2innineneighborhoodsewershedsindetroittricountyareaunitedstatesassessingpercapitasarscov2estimationsandcovid19incidence
AT zhaoliang surveillanceofsarscov2innineneighborhoodsewershedsindetroittricountyareaunitedstatesassessingpercapitasarscov2estimationsandcovid19incidence
AT spoonermaddie surveillanceofsarscov2innineneighborhoodsewershedsindetroittricountyareaunitedstatesassessingpercapitasarscov2estimationsandcovid19incidence
AT gentryzach surveillanceofsarscov2innineneighborhoodsewershedsindetroittricountyareaunitedstatesassessingpercapitasarscov2estimationsandcovid19incidence
AT zouyangyang surveillanceofsarscov2innineneighborhoodsewershedsindetroittricountyareaunitedstatesassessingpercapitasarscov2estimationsandcovid19incidence
AT rhodesgeoff surveillanceofsarscov2innineneighborhoodsewershedsindetroittricountyareaunitedstatesassessingpercapitasarscov2estimationsandcovid19incidence
AT lihui surveillanceofsarscov2innineneighborhoodsewershedsindetroittricountyareaunitedstatesassessingpercapitasarscov2estimationsandcovid19incidence
AT kayeandrew surveillanceofsarscov2innineneighborhoodsewershedsindetroittricountyareaunitedstatesassessingpercapitasarscov2estimationsandcovid19incidence
AT nortonjohn surveillanceofsarscov2innineneighborhoodsewershedsindetroittricountyareaunitedstatesassessingpercapitasarscov2estimationsandcovid19incidence
AT xagorarakiirene surveillanceofsarscov2innineneighborhoodsewershedsindetroittricountyareaunitedstatesassessingpercapitasarscov2estimationsandcovid19incidence