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Pre-hospital prediction of adverse outcomes in patients with suspected COVID-19: Development, application and comparison of machine learning and deep learning methods

BACKGROUND: COVID-19 infected millions of people and increased mortality worldwide. Patients with suspected COVID-19 utilised emergency medical services (EMS) and attended emergency departments, resulting in increased pressures and waiting times. Rapid and accurate decision-making is required to ide...

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Autores principales: Hasan, M., Bath, P.A., Marincowitz, C., Sutton, L., Pilbery, R., Hopfgartner, F., Mazumdar, S., Campbell, R., Stone, T., Thomas, B., Bell, F., Turner, J., Biggs, K., Petrie, J., Goodacre, S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Authors. Published by Elsevier Ltd. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9420071/
https://www.ncbi.nlm.nih.gov/pubmed/36327887
http://dx.doi.org/10.1016/j.compbiomed.2022.106024
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author Hasan, M.
Bath, P.A.
Marincowitz, C.
Sutton, L.
Pilbery, R.
Hopfgartner, F.
Mazumdar, S.
Campbell, R.
Stone, T.
Thomas, B.
Bell, F.
Turner, J.
Biggs, K.
Petrie, J.
Goodacre, S.
author_facet Hasan, M.
Bath, P.A.
Marincowitz, C.
Sutton, L.
Pilbery, R.
Hopfgartner, F.
Mazumdar, S.
Campbell, R.
Stone, T.
Thomas, B.
Bell, F.
Turner, J.
Biggs, K.
Petrie, J.
Goodacre, S.
author_sort Hasan, M.
collection PubMed
description BACKGROUND: COVID-19 infected millions of people and increased mortality worldwide. Patients with suspected COVID-19 utilised emergency medical services (EMS) and attended emergency departments, resulting in increased pressures and waiting times. Rapid and accurate decision-making is required to identify patients at high-risk of clinical deterioration following COVID-19 infection, whilst also avoiding unnecessary hospital admissions. Our study aimed to develop artificial intelligence models to predict adverse outcomes in suspected COVID-19 patients attended by EMS clinicians. METHOD: Linked ambulance service data were obtained for 7,549 adult patients with suspected COVID-19 infection attended by EMS clinicians in the Yorkshire and Humber region (England) from 18-03-2020 to 29-06-2020. We used support vector machines (SVM), extreme gradient boosting, artificial neural network (ANN) models, ensemble learning methods and logistic regression to predict the primary outcome (death or need for organ support within 30 days). Models were compared with two baselines: the decision made by EMS clinicians to convey patients to hospital, and the PRIEST clinical severity score. RESULTS: Of the 7,549 patients attended by EMS clinicians, 1,330 (17.6%) experienced the primary outcome. Machine Learning methods showed slight improvements in sensitivity over baseline results. Further improvements were obtained using stacking ensemble methods, the best geometric mean (GM) results were obtained using SVM and ANN as base learners when maximising sensitivity and specificity. CONCLUSIONS: These methods could potentially reduce the numbers of patients conveyed to hospital without a concomitant increase in adverse outcomes. Further work is required to test the models externally and develop an automated system for use in clinical settings.
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spelling pubmed-94200712022-08-30 Pre-hospital prediction of adverse outcomes in patients with suspected COVID-19: Development, application and comparison of machine learning and deep learning methods Hasan, M. Bath, P.A. Marincowitz, C. Sutton, L. Pilbery, R. Hopfgartner, F. Mazumdar, S. Campbell, R. Stone, T. Thomas, B. Bell, F. Turner, J. Biggs, K. Petrie, J. Goodacre, S. Comput Biol Med Article BACKGROUND: COVID-19 infected millions of people and increased mortality worldwide. Patients with suspected COVID-19 utilised emergency medical services (EMS) and attended emergency departments, resulting in increased pressures and waiting times. Rapid and accurate decision-making is required to identify patients at high-risk of clinical deterioration following COVID-19 infection, whilst also avoiding unnecessary hospital admissions. Our study aimed to develop artificial intelligence models to predict adverse outcomes in suspected COVID-19 patients attended by EMS clinicians. METHOD: Linked ambulance service data were obtained for 7,549 adult patients with suspected COVID-19 infection attended by EMS clinicians in the Yorkshire and Humber region (England) from 18-03-2020 to 29-06-2020. We used support vector machines (SVM), extreme gradient boosting, artificial neural network (ANN) models, ensemble learning methods and logistic regression to predict the primary outcome (death or need for organ support within 30 days). Models were compared with two baselines: the decision made by EMS clinicians to convey patients to hospital, and the PRIEST clinical severity score. RESULTS: Of the 7,549 patients attended by EMS clinicians, 1,330 (17.6%) experienced the primary outcome. Machine Learning methods showed slight improvements in sensitivity over baseline results. Further improvements were obtained using stacking ensemble methods, the best geometric mean (GM) results were obtained using SVM and ANN as base learners when maximising sensitivity and specificity. CONCLUSIONS: These methods could potentially reduce the numbers of patients conveyed to hospital without a concomitant increase in adverse outcomes. Further work is required to test the models externally and develop an automated system for use in clinical settings. The Authors. Published by Elsevier Ltd. 2022-12 2022-08-28 /pmc/articles/PMC9420071/ /pubmed/36327887 http://dx.doi.org/10.1016/j.compbiomed.2022.106024 Text en © 2022 The Authors Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Hasan, M.
Bath, P.A.
Marincowitz, C.
Sutton, L.
Pilbery, R.
Hopfgartner, F.
Mazumdar, S.
Campbell, R.
Stone, T.
Thomas, B.
Bell, F.
Turner, J.
Biggs, K.
Petrie, J.
Goodacre, S.
Pre-hospital prediction of adverse outcomes in patients with suspected COVID-19: Development, application and comparison of machine learning and deep learning methods
title Pre-hospital prediction of adverse outcomes in patients with suspected COVID-19: Development, application and comparison of machine learning and deep learning methods
title_full Pre-hospital prediction of adverse outcomes in patients with suspected COVID-19: Development, application and comparison of machine learning and deep learning methods
title_fullStr Pre-hospital prediction of adverse outcomes in patients with suspected COVID-19: Development, application and comparison of machine learning and deep learning methods
title_full_unstemmed Pre-hospital prediction of adverse outcomes in patients with suspected COVID-19: Development, application and comparison of machine learning and deep learning methods
title_short Pre-hospital prediction of adverse outcomes in patients with suspected COVID-19: Development, application and comparison of machine learning and deep learning methods
title_sort pre-hospital prediction of adverse outcomes in patients with suspected covid-19: development, application and comparison of machine learning and deep learning methods
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9420071/
https://www.ncbi.nlm.nih.gov/pubmed/36327887
http://dx.doi.org/10.1016/j.compbiomed.2022.106024
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