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High-Resolution Histopathological Image Classification Model Based on Fused Heterogeneous Networks with Self-Supervised Feature Representation

Applying machine learning technology to automatic image analysis and auxiliary diagnosis of whole slide image (WSI) may help to improve the efficiency, objectivity, and consistency of pathological diagnosis. Due to its extremely high resolution, it is still a great challenge to directly process WSI...

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Detalles Bibliográficos
Autores principales: Lai, Zhi-Fei, Zhang, Gang, Zhang, Xiao-Bo, Liu, Hong-Tao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9420597/
https://www.ncbi.nlm.nih.gov/pubmed/36046446
http://dx.doi.org/10.1155/2022/8007713
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author Lai, Zhi-Fei
Zhang, Gang
Zhang, Xiao-Bo
Liu, Hong-Tao
author_facet Lai, Zhi-Fei
Zhang, Gang
Zhang, Xiao-Bo
Liu, Hong-Tao
author_sort Lai, Zhi-Fei
collection PubMed
description Applying machine learning technology to automatic image analysis and auxiliary diagnosis of whole slide image (WSI) may help to improve the efficiency, objectivity, and consistency of pathological diagnosis. Due to its extremely high resolution, it is still a great challenge to directly process WSI through deep neural networks. In this paper, we propose a novel model for the task of classification of WSIs. The model is composed of two parts. The first part is a self-supervised encoding network with a UNet-like architecture. Each patch from a WSI is encoded as a compressed latent representation. These features are placed according to their corresponding patch's original location in WSI, forming a feature cube. The second part is a classification network fused by 4 famous network blocks with heterogeneous architectures, with feature cube as input. Our model effectively expresses the feature and preserves location information of each patch. The fused network integrates heterogeneous features generated by different networks which yields robust classification results. The model is evaluated on two public datasets with comparison to baseline models. The evaluation results show the effectiveness of the proposed model.
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spelling pubmed-94205972022-08-30 High-Resolution Histopathological Image Classification Model Based on Fused Heterogeneous Networks with Self-Supervised Feature Representation Lai, Zhi-Fei Zhang, Gang Zhang, Xiao-Bo Liu, Hong-Tao Biomed Res Int Research Article Applying machine learning technology to automatic image analysis and auxiliary diagnosis of whole slide image (WSI) may help to improve the efficiency, objectivity, and consistency of pathological diagnosis. Due to its extremely high resolution, it is still a great challenge to directly process WSI through deep neural networks. In this paper, we propose a novel model for the task of classification of WSIs. The model is composed of two parts. The first part is a self-supervised encoding network with a UNet-like architecture. Each patch from a WSI is encoded as a compressed latent representation. These features are placed according to their corresponding patch's original location in WSI, forming a feature cube. The second part is a classification network fused by 4 famous network blocks with heterogeneous architectures, with feature cube as input. Our model effectively expresses the feature and preserves location information of each patch. The fused network integrates heterogeneous features generated by different networks which yields robust classification results. The model is evaluated on two public datasets with comparison to baseline models. The evaluation results show the effectiveness of the proposed model. Hindawi 2022-08-21 /pmc/articles/PMC9420597/ /pubmed/36046446 http://dx.doi.org/10.1155/2022/8007713 Text en Copyright © 2022 Zhi-Fei Lai et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Lai, Zhi-Fei
Zhang, Gang
Zhang, Xiao-Bo
Liu, Hong-Tao
High-Resolution Histopathological Image Classification Model Based on Fused Heterogeneous Networks with Self-Supervised Feature Representation
title High-Resolution Histopathological Image Classification Model Based on Fused Heterogeneous Networks with Self-Supervised Feature Representation
title_full High-Resolution Histopathological Image Classification Model Based on Fused Heterogeneous Networks with Self-Supervised Feature Representation
title_fullStr High-Resolution Histopathological Image Classification Model Based on Fused Heterogeneous Networks with Self-Supervised Feature Representation
title_full_unstemmed High-Resolution Histopathological Image Classification Model Based on Fused Heterogeneous Networks with Self-Supervised Feature Representation
title_short High-Resolution Histopathological Image Classification Model Based on Fused Heterogeneous Networks with Self-Supervised Feature Representation
title_sort high-resolution histopathological image classification model based on fused heterogeneous networks with self-supervised feature representation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9420597/
https://www.ncbi.nlm.nih.gov/pubmed/36046446
http://dx.doi.org/10.1155/2022/8007713
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