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LncRNA DUXAP8 as a prognostic biomarker for various cancers: A meta-analysis and bioinformatics analysis

Background: Dual homeoboxes A pseudogene 8 (DUXAP8) is a newly discovered long noncoding RNA that has been shown to function as an oncogene in a variety of human malignant cancers. By integrating available data, this meta-analysis sought to determine the relationship between clinical prognosis and D...

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Autores principales: Wang, Yongfeng, Jiang, Xianglai, Zhang, Dongzhi, Zhao, Yuanbin, Han, Xiaoyong, Zhu, Lihui, Ren, Jingyao, Liu, Yubin, You, Jiarong, Wang, Haolan, Cai, Hui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9420988/
https://www.ncbi.nlm.nih.gov/pubmed/36046244
http://dx.doi.org/10.3389/fgene.2022.907774
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author Wang, Yongfeng
Jiang, Xianglai
Zhang, Dongzhi
Zhao, Yuanbin
Han, Xiaoyong
Zhu, Lihui
Ren, Jingyao
Liu, Yubin
You, Jiarong
Wang, Haolan
Cai, Hui
author_facet Wang, Yongfeng
Jiang, Xianglai
Zhang, Dongzhi
Zhao, Yuanbin
Han, Xiaoyong
Zhu, Lihui
Ren, Jingyao
Liu, Yubin
You, Jiarong
Wang, Haolan
Cai, Hui
author_sort Wang, Yongfeng
collection PubMed
description Background: Dual homeoboxes A pseudogene 8 (DUXAP8) is a newly discovered long noncoding RNA that has been shown to function as an oncogene in a variety of human malignant cancers. By integrating available data, this meta-analysis sought to determine the relationship between clinical prognosis and DUXAP8 expression levels in diverse malignancies. Materials and methods: A systematic search was performed to identify eligible studies from several electronic databases from their inception to 25 October 2021. Pooled odds ratios and hazard ratios with 95% CI were used to estimate the association between DUXAP8 expression and survival. For survival analysis, the Kaplan-Meier method and COX analysis were used. Furthermore, we utilized Spearman’s correlation analysis to explore the correlation between DUXAP8 and tumor mutational burden (TMB), microsatellite instability (MSI), the related genes of mismatch repair (MMR), DNA methyltransferases (DNMTs), and immune checkpoint biomarkers. Results: Our findings indicated that overexpression of DUXAP8 was related to poor overall survival (OS) (HR = 1.63, 95% CI, 1.49–1.77, p < 0.001). In addition, elevated DUXAP8 expression was closely related to poor OS in several cancers in the TCGA database. Moreover, DUXAP8 expression has been associated with TMB, MSI, and MMR in a variety of malignancies. Conclusion: This study revealed that DUXAP8 might serve as a prognostic biomarker and potential therapeutic target for cancer. It can be used to improve cancer diagnosis, discover potential treatment targets, and improve prognosis.
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spelling pubmed-94209882022-08-30 LncRNA DUXAP8 as a prognostic biomarker for various cancers: A meta-analysis and bioinformatics analysis Wang, Yongfeng Jiang, Xianglai Zhang, Dongzhi Zhao, Yuanbin Han, Xiaoyong Zhu, Lihui Ren, Jingyao Liu, Yubin You, Jiarong Wang, Haolan Cai, Hui Front Genet Genetics Background: Dual homeoboxes A pseudogene 8 (DUXAP8) is a newly discovered long noncoding RNA that has been shown to function as an oncogene in a variety of human malignant cancers. By integrating available data, this meta-analysis sought to determine the relationship between clinical prognosis and DUXAP8 expression levels in diverse malignancies. Materials and methods: A systematic search was performed to identify eligible studies from several electronic databases from their inception to 25 October 2021. Pooled odds ratios and hazard ratios with 95% CI were used to estimate the association between DUXAP8 expression and survival. For survival analysis, the Kaplan-Meier method and COX analysis were used. Furthermore, we utilized Spearman’s correlation analysis to explore the correlation between DUXAP8 and tumor mutational burden (TMB), microsatellite instability (MSI), the related genes of mismatch repair (MMR), DNA methyltransferases (DNMTs), and immune checkpoint biomarkers. Results: Our findings indicated that overexpression of DUXAP8 was related to poor overall survival (OS) (HR = 1.63, 95% CI, 1.49–1.77, p < 0.001). In addition, elevated DUXAP8 expression was closely related to poor OS in several cancers in the TCGA database. Moreover, DUXAP8 expression has been associated with TMB, MSI, and MMR in a variety of malignancies. Conclusion: This study revealed that DUXAP8 might serve as a prognostic biomarker and potential therapeutic target for cancer. It can be used to improve cancer diagnosis, discover potential treatment targets, and improve prognosis. Frontiers Media S.A. 2022-08-15 /pmc/articles/PMC9420988/ /pubmed/36046244 http://dx.doi.org/10.3389/fgene.2022.907774 Text en Copyright © 2022 Wang, Jiang, Zhang, Zhao, Han, Zhu, Ren, Liu, You, Wang and Cai. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Wang, Yongfeng
Jiang, Xianglai
Zhang, Dongzhi
Zhao, Yuanbin
Han, Xiaoyong
Zhu, Lihui
Ren, Jingyao
Liu, Yubin
You, Jiarong
Wang, Haolan
Cai, Hui
LncRNA DUXAP8 as a prognostic biomarker for various cancers: A meta-analysis and bioinformatics analysis
title LncRNA DUXAP8 as a prognostic biomarker for various cancers: A meta-analysis and bioinformatics analysis
title_full LncRNA DUXAP8 as a prognostic biomarker for various cancers: A meta-analysis and bioinformatics analysis
title_fullStr LncRNA DUXAP8 as a prognostic biomarker for various cancers: A meta-analysis and bioinformatics analysis
title_full_unstemmed LncRNA DUXAP8 as a prognostic biomarker for various cancers: A meta-analysis and bioinformatics analysis
title_short LncRNA DUXAP8 as a prognostic biomarker for various cancers: A meta-analysis and bioinformatics analysis
title_sort lncrna duxap8 as a prognostic biomarker for various cancers: a meta-analysis and bioinformatics analysis
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9420988/
https://www.ncbi.nlm.nih.gov/pubmed/36046244
http://dx.doi.org/10.3389/fgene.2022.907774
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