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The complete chloroplast genome of Strobilanthes crispus (Acanthaceae)
We reported and characterized the complete chloroplast genome sequence of Strobilanthes crispus Blume 1826. Strobilanthes crispus belongs to the Acanthaceae family and has a number of local names including Batuzin, Bayam Karang, Kotz Bellin, and Pekka Batu, which is native to Malaysian with diverse...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9423863/ https://www.ncbi.nlm.nih.gov/pubmed/36046107 http://dx.doi.org/10.1080/23802359.2022.2111979 |
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author | Wan, Guoqing Liu, Yanhui Zheng, Yanjun Gu, Xuefeng Lu, Changlian |
author_facet | Wan, Guoqing Liu, Yanhui Zheng, Yanjun Gu, Xuefeng Lu, Changlian |
author_sort | Wan, Guoqing |
collection | PubMed |
description | We reported and characterized the complete chloroplast genome sequence of Strobilanthes crispus Blume 1826. Strobilanthes crispus belongs to the Acanthaceae family and has a number of local names including Batuzin, Bayam Karang, Kotz Bellin, and Pekka Batu, which is native to Malaysian with diverse beneficial uses. Green leaves were determined using next-generation sequencing. We found that the entire chloroplast genome of S. crispus was 144,987 bp in length, included four segments, named a large single-copy (LSC) region (92,556 bp), a small single-copy (SSC) region (17,783 bp), and a pair inverted repeat regions (IRs) (17,324 bp in each), respectively. The chloroplast genome of S. crispus contained a total of 129 functional genes, including 84 protein-coding genes, 37 transfer RNAs (tRNAs), and eight ribosomal RNA (rRNA) genes. The phylogenetic tree reconstructed by nine chloroplast genomes reveals that S. crispus is most closely related to Strobilanthes bantonensis and Strobilanthes cusia. |
format | Online Article Text |
id | pubmed-9423863 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-94238632022-08-30 The complete chloroplast genome of Strobilanthes crispus (Acanthaceae) Wan, Guoqing Liu, Yanhui Zheng, Yanjun Gu, Xuefeng Lu, Changlian Mitochondrial DNA B Resour Plastome Announcement We reported and characterized the complete chloroplast genome sequence of Strobilanthes crispus Blume 1826. Strobilanthes crispus belongs to the Acanthaceae family and has a number of local names including Batuzin, Bayam Karang, Kotz Bellin, and Pekka Batu, which is native to Malaysian with diverse beneficial uses. Green leaves were determined using next-generation sequencing. We found that the entire chloroplast genome of S. crispus was 144,987 bp in length, included four segments, named a large single-copy (LSC) region (92,556 bp), a small single-copy (SSC) region (17,783 bp), and a pair inverted repeat regions (IRs) (17,324 bp in each), respectively. The chloroplast genome of S. crispus contained a total of 129 functional genes, including 84 protein-coding genes, 37 transfer RNAs (tRNAs), and eight ribosomal RNA (rRNA) genes. The phylogenetic tree reconstructed by nine chloroplast genomes reveals that S. crispus is most closely related to Strobilanthes bantonensis and Strobilanthes cusia. Taylor & Francis 2022-08-26 /pmc/articles/PMC9423863/ /pubmed/36046107 http://dx.doi.org/10.1080/23802359.2022.2111979 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Plastome Announcement Wan, Guoqing Liu, Yanhui Zheng, Yanjun Gu, Xuefeng Lu, Changlian The complete chloroplast genome of Strobilanthes crispus (Acanthaceae) |
title | The complete chloroplast genome of Strobilanthes crispus (Acanthaceae) |
title_full | The complete chloroplast genome of Strobilanthes crispus (Acanthaceae) |
title_fullStr | The complete chloroplast genome of Strobilanthes crispus (Acanthaceae) |
title_full_unstemmed | The complete chloroplast genome of Strobilanthes crispus (Acanthaceae) |
title_short | The complete chloroplast genome of Strobilanthes crispus (Acanthaceae) |
title_sort | complete chloroplast genome of strobilanthes crispus (acanthaceae) |
topic | Plastome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9423863/ https://www.ncbi.nlm.nih.gov/pubmed/36046107 http://dx.doi.org/10.1080/23802359.2022.2111979 |
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