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Polarimetric observables for the enhanced visualization of plant diseases
This paper highlights the potential of using polarimetric methods for the inspection of plant diseased tissues. We show how depolarizing observables are a suitable tool for the accurate discrimination between healthy and diseased tissues due to the pathogen infection of plant samples. The analysis i...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9428171/ https://www.ncbi.nlm.nih.gov/pubmed/36042370 http://dx.doi.org/10.1038/s41598-022-19088-6 |
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author | Rodríguez, Carla Garcia-Caurel, Enrique Garnatje, Teresa Serra i Ribas, Mireia Luque, Jordi Campos, Juan Lizana, Angel |
author_facet | Rodríguez, Carla Garcia-Caurel, Enrique Garnatje, Teresa Serra i Ribas, Mireia Luque, Jordi Campos, Juan Lizana, Angel |
author_sort | Rodríguez, Carla |
collection | PubMed |
description | This paper highlights the potential of using polarimetric methods for the inspection of plant diseased tissues. We show how depolarizing observables are a suitable tool for the accurate discrimination between healthy and diseased tissues due to the pathogen infection of plant samples. The analysis is conducted on a set of different plant specimens showing various disease symptoms and infection stages. By means of a complete image Mueller polarimeter, we measure the experimental Mueller matrices of the samples, from which we calculate a set of metrics analyzing the depolarization content of the inspected leaves. From calculated metrics, we demonstrate, in a qualitative and quantitative way, how depolarizing information of vegetal tissues leads to the enhancement of image contrast between healthy and diseased tissues, as well as to the revelation of wounded regions which cannot be detected by means of regular visual inspections. Moreover, we also propose a pseudo-colored image method, based on the depolarizing metrics, capable to further enhance the visual image contrast between healthy and diseased regions in plants. The ability of proposed methods to characterize plant diseases (even at early stages of infection) may be of interest for preventing yield losses due to different plant pathogens. |
format | Online Article Text |
id | pubmed-9428171 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-94281712022-09-01 Polarimetric observables for the enhanced visualization of plant diseases Rodríguez, Carla Garcia-Caurel, Enrique Garnatje, Teresa Serra i Ribas, Mireia Luque, Jordi Campos, Juan Lizana, Angel Sci Rep Article This paper highlights the potential of using polarimetric methods for the inspection of plant diseased tissues. We show how depolarizing observables are a suitable tool for the accurate discrimination between healthy and diseased tissues due to the pathogen infection of plant samples. The analysis is conducted on a set of different plant specimens showing various disease symptoms and infection stages. By means of a complete image Mueller polarimeter, we measure the experimental Mueller matrices of the samples, from which we calculate a set of metrics analyzing the depolarization content of the inspected leaves. From calculated metrics, we demonstrate, in a qualitative and quantitative way, how depolarizing information of vegetal tissues leads to the enhancement of image contrast between healthy and diseased tissues, as well as to the revelation of wounded regions which cannot be detected by means of regular visual inspections. Moreover, we also propose a pseudo-colored image method, based on the depolarizing metrics, capable to further enhance the visual image contrast between healthy and diseased regions in plants. The ability of proposed methods to characterize plant diseases (even at early stages of infection) may be of interest for preventing yield losses due to different plant pathogens. Nature Publishing Group UK 2022-08-30 /pmc/articles/PMC9428171/ /pubmed/36042370 http://dx.doi.org/10.1038/s41598-022-19088-6 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Rodríguez, Carla Garcia-Caurel, Enrique Garnatje, Teresa Serra i Ribas, Mireia Luque, Jordi Campos, Juan Lizana, Angel Polarimetric observables for the enhanced visualization of plant diseases |
title | Polarimetric observables for the enhanced visualization of plant diseases |
title_full | Polarimetric observables for the enhanced visualization of plant diseases |
title_fullStr | Polarimetric observables for the enhanced visualization of plant diseases |
title_full_unstemmed | Polarimetric observables for the enhanced visualization of plant diseases |
title_short | Polarimetric observables for the enhanced visualization of plant diseases |
title_sort | polarimetric observables for the enhanced visualization of plant diseases |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9428171/ https://www.ncbi.nlm.nih.gov/pubmed/36042370 http://dx.doi.org/10.1038/s41598-022-19088-6 |
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