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Polarimetric observables for the enhanced visualization of plant diseases

This paper highlights the potential of using polarimetric methods for the inspection of plant diseased tissues. We show how depolarizing observables are a suitable tool for the accurate discrimination between healthy and diseased tissues due to the pathogen infection of plant samples. The analysis i...

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Autores principales: Rodríguez, Carla, Garcia-Caurel, Enrique, Garnatje, Teresa, Serra i Ribas, Mireia, Luque, Jordi, Campos, Juan, Lizana, Angel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9428171/
https://www.ncbi.nlm.nih.gov/pubmed/36042370
http://dx.doi.org/10.1038/s41598-022-19088-6
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author Rodríguez, Carla
Garcia-Caurel, Enrique
Garnatje, Teresa
Serra i Ribas, Mireia
Luque, Jordi
Campos, Juan
Lizana, Angel
author_facet Rodríguez, Carla
Garcia-Caurel, Enrique
Garnatje, Teresa
Serra i Ribas, Mireia
Luque, Jordi
Campos, Juan
Lizana, Angel
author_sort Rodríguez, Carla
collection PubMed
description This paper highlights the potential of using polarimetric methods for the inspection of plant diseased tissues. We show how depolarizing observables are a suitable tool for the accurate discrimination between healthy and diseased tissues due to the pathogen infection of plant samples. The analysis is conducted on a set of different plant specimens showing various disease symptoms and infection stages. By means of a complete image Mueller polarimeter, we measure the experimental Mueller matrices of the samples, from which we calculate a set of metrics analyzing the depolarization content of the inspected leaves. From calculated metrics, we demonstrate, in a qualitative and quantitative way, how depolarizing information of vegetal tissues leads to the enhancement of image contrast between healthy and diseased tissues, as well as to the revelation of wounded regions which cannot be detected by means of regular visual inspections. Moreover, we also propose a pseudo-colored image method, based on the depolarizing metrics, capable to further enhance the visual image contrast between healthy and diseased regions in plants. The ability of proposed methods to characterize plant diseases (even at early stages of infection) may be of interest for preventing yield losses due to different plant pathogens.
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spelling pubmed-94281712022-09-01 Polarimetric observables for the enhanced visualization of plant diseases Rodríguez, Carla Garcia-Caurel, Enrique Garnatje, Teresa Serra i Ribas, Mireia Luque, Jordi Campos, Juan Lizana, Angel Sci Rep Article This paper highlights the potential of using polarimetric methods for the inspection of plant diseased tissues. We show how depolarizing observables are a suitable tool for the accurate discrimination between healthy and diseased tissues due to the pathogen infection of plant samples. The analysis is conducted on a set of different plant specimens showing various disease symptoms and infection stages. By means of a complete image Mueller polarimeter, we measure the experimental Mueller matrices of the samples, from which we calculate a set of metrics analyzing the depolarization content of the inspected leaves. From calculated metrics, we demonstrate, in a qualitative and quantitative way, how depolarizing information of vegetal tissues leads to the enhancement of image contrast between healthy and diseased tissues, as well as to the revelation of wounded regions which cannot be detected by means of regular visual inspections. Moreover, we also propose a pseudo-colored image method, based on the depolarizing metrics, capable to further enhance the visual image contrast between healthy and diseased regions in plants. The ability of proposed methods to characterize plant diseases (even at early stages of infection) may be of interest for preventing yield losses due to different plant pathogens. Nature Publishing Group UK 2022-08-30 /pmc/articles/PMC9428171/ /pubmed/36042370 http://dx.doi.org/10.1038/s41598-022-19088-6 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Rodríguez, Carla
Garcia-Caurel, Enrique
Garnatje, Teresa
Serra i Ribas, Mireia
Luque, Jordi
Campos, Juan
Lizana, Angel
Polarimetric observables for the enhanced visualization of plant diseases
title Polarimetric observables for the enhanced visualization of plant diseases
title_full Polarimetric observables for the enhanced visualization of plant diseases
title_fullStr Polarimetric observables for the enhanced visualization of plant diseases
title_full_unstemmed Polarimetric observables for the enhanced visualization of plant diseases
title_short Polarimetric observables for the enhanced visualization of plant diseases
title_sort polarimetric observables for the enhanced visualization of plant diseases
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9428171/
https://www.ncbi.nlm.nih.gov/pubmed/36042370
http://dx.doi.org/10.1038/s41598-022-19088-6
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