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The role of inter-regional mobility in forecasting SARS-CoV-2 transmission
In this paper, we present a method to forecast the spread of SARS-CoV-2 across regions with a focus on the role of mobility. Mobility has previously been shown to play a significant role in the spread of the virus, particularly between regions. Here, we investigate under which epidemiological circum...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9428544/ https://www.ncbi.nlm.nih.gov/pubmed/36043288 http://dx.doi.org/10.1098/rsif.2022.0486 |
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author | Schoot Uiterkamp, Martijn H. H. Gösgens, Martijn Heesterbeek, Hans van der Hofstad, Remco Litvak, Nelly |
author_facet | Schoot Uiterkamp, Martijn H. H. Gösgens, Martijn Heesterbeek, Hans van der Hofstad, Remco Litvak, Nelly |
author_sort | Schoot Uiterkamp, Martijn H. H. |
collection | PubMed |
description | In this paper, we present a method to forecast the spread of SARS-CoV-2 across regions with a focus on the role of mobility. Mobility has previously been shown to play a significant role in the spread of the virus, particularly between regions. Here, we investigate under which epidemiological circumstances incorporating mobility into transmission models yields improvements in the accuracy of forecasting, where we take the situation in The Netherlands during and after the first wave of transmission in 2020 as a case study. We assess the quality of forecasting on the detailed level of municipalities, instead of on a nationwide level. To model transmissions, we use a simple mobility-enhanced SEIR compartmental model with subpopulations corresponding to the Dutch municipalities. We use commuter information to quantify mobility, and develop a method based on maximum likelihood estimation to determine the other relevant parameters. We show that taking inter-regional mobility into account generally leads to an improvement in forecast quality. However, at times when policies are in place that aim to reduce contacts or travel, this improvement is very small. By contrast, the improvement becomes larger when municipalities have a relatively large amount of incoming mobility compared with the number of inhabitants. |
format | Online Article Text |
id | pubmed-9428544 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-94285442022-08-31 The role of inter-regional mobility in forecasting SARS-CoV-2 transmission Schoot Uiterkamp, Martijn H. H. Gösgens, Martijn Heesterbeek, Hans van der Hofstad, Remco Litvak, Nelly J R Soc Interface Life Sciences–Mathematics interface In this paper, we present a method to forecast the spread of SARS-CoV-2 across regions with a focus on the role of mobility. Mobility has previously been shown to play a significant role in the spread of the virus, particularly between regions. Here, we investigate under which epidemiological circumstances incorporating mobility into transmission models yields improvements in the accuracy of forecasting, where we take the situation in The Netherlands during and after the first wave of transmission in 2020 as a case study. We assess the quality of forecasting on the detailed level of municipalities, instead of on a nationwide level. To model transmissions, we use a simple mobility-enhanced SEIR compartmental model with subpopulations corresponding to the Dutch municipalities. We use commuter information to quantify mobility, and develop a method based on maximum likelihood estimation to determine the other relevant parameters. We show that taking inter-regional mobility into account generally leads to an improvement in forecast quality. However, at times when policies are in place that aim to reduce contacts or travel, this improvement is very small. By contrast, the improvement becomes larger when municipalities have a relatively large amount of incoming mobility compared with the number of inhabitants. The Royal Society 2022-08-31 /pmc/articles/PMC9428544/ /pubmed/36043288 http://dx.doi.org/10.1098/rsif.2022.0486 Text en © 2022 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Life Sciences–Mathematics interface Schoot Uiterkamp, Martijn H. H. Gösgens, Martijn Heesterbeek, Hans van der Hofstad, Remco Litvak, Nelly The role of inter-regional mobility in forecasting SARS-CoV-2 transmission |
title | The role of inter-regional mobility in forecasting SARS-CoV-2 transmission |
title_full | The role of inter-regional mobility in forecasting SARS-CoV-2 transmission |
title_fullStr | The role of inter-regional mobility in forecasting SARS-CoV-2 transmission |
title_full_unstemmed | The role of inter-regional mobility in forecasting SARS-CoV-2 transmission |
title_short | The role of inter-regional mobility in forecasting SARS-CoV-2 transmission |
title_sort | role of inter-regional mobility in forecasting sars-cov-2 transmission |
topic | Life Sciences–Mathematics interface |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9428544/ https://www.ncbi.nlm.nih.gov/pubmed/36043288 http://dx.doi.org/10.1098/rsif.2022.0486 |
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