Cargando…
Transcriptome sequencing and gas chromatography–mass spectrometry analyses provide insights into β-caryophyllene biosynthesis in Brassica campestris
Sesquiterpenes are important defensive secondary metabolites and aroma components. However, limited information is available on the mechanism of sesquiterpene formation and composition in the non-heading Chinese cabbage (NHCC) leaf. Therefore, headspace solid-phase microextraction/gas chromatography...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9428917/ https://www.ncbi.nlm.nih.gov/pubmed/36060474 http://dx.doi.org/10.1016/j.fochms.2022.100129 |
_version_ | 1784779272383102976 |
---|---|
author | Wang, Haibin Zong, Chen Bai, Aimei Yuan, Shuilin Li, Yan Yu, Zhanghong Tian, Ruiping Liu, Tongkun Hou, Xilin Li, Ying |
author_facet | Wang, Haibin Zong, Chen Bai, Aimei Yuan, Shuilin Li, Yan Yu, Zhanghong Tian, Ruiping Liu, Tongkun Hou, Xilin Li, Ying |
author_sort | Wang, Haibin |
collection | PubMed |
description | Sesquiterpenes are important defensive secondary metabolites and aroma components. However, limited information is available on the mechanism of sesquiterpene formation and composition in the non-heading Chinese cabbage (NHCC) leaf. Therefore, headspace solid-phase microextraction/gas chromatography–mass spectrometry (HS-SPME/GC–MS) combined with transcriptome analysis was used to study the mechanism of volatile organic compound formation. A total of 26 volatile organic compounds were identified in two NHCC cultivars ‘SZQ’ and ‘XQC’ and their F1 hybrids. Among these, sesquiterpene β-caryophyllene was identified only in ‘XQC’ and F1. Five genes encoding caryophyllene synthase were identified. The candidate β-caryophyllene synthase genes BcTPSa11 and BcTPSa21 had high expression levels only in ‘XQC’ and F1. In addition, several transcription factors of MYB-related, MYB, bHLH, and AP2/ERF families were identified by co-expression, suggesting that they regulate β-caryophyllene biosynthesis. Our results provide a molecular basis for sesquiterpene biosynthesis as well as insights into the regulatory network of β-caryophyllene in NHCC. |
format | Online Article Text |
id | pubmed-9428917 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-94289172022-09-01 Transcriptome sequencing and gas chromatography–mass spectrometry analyses provide insights into β-caryophyllene biosynthesis in Brassica campestris Wang, Haibin Zong, Chen Bai, Aimei Yuan, Shuilin Li, Yan Yu, Zhanghong Tian, Ruiping Liu, Tongkun Hou, Xilin Li, Ying Food Chem (Oxf) Research Article Sesquiterpenes are important defensive secondary metabolites and aroma components. However, limited information is available on the mechanism of sesquiterpene formation and composition in the non-heading Chinese cabbage (NHCC) leaf. Therefore, headspace solid-phase microextraction/gas chromatography–mass spectrometry (HS-SPME/GC–MS) combined with transcriptome analysis was used to study the mechanism of volatile organic compound formation. A total of 26 volatile organic compounds were identified in two NHCC cultivars ‘SZQ’ and ‘XQC’ and their F1 hybrids. Among these, sesquiterpene β-caryophyllene was identified only in ‘XQC’ and F1. Five genes encoding caryophyllene synthase were identified. The candidate β-caryophyllene synthase genes BcTPSa11 and BcTPSa21 had high expression levels only in ‘XQC’ and F1. In addition, several transcription factors of MYB-related, MYB, bHLH, and AP2/ERF families were identified by co-expression, suggesting that they regulate β-caryophyllene biosynthesis. Our results provide a molecular basis for sesquiterpene biosynthesis as well as insights into the regulatory network of β-caryophyllene in NHCC. Elsevier 2022-08-13 /pmc/articles/PMC9428917/ /pubmed/36060474 http://dx.doi.org/10.1016/j.fochms.2022.100129 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Wang, Haibin Zong, Chen Bai, Aimei Yuan, Shuilin Li, Yan Yu, Zhanghong Tian, Ruiping Liu, Tongkun Hou, Xilin Li, Ying Transcriptome sequencing and gas chromatography–mass spectrometry analyses provide insights into β-caryophyllene biosynthesis in Brassica campestris |
title | Transcriptome sequencing and gas chromatography–mass spectrometry analyses provide insights into β-caryophyllene biosynthesis in Brassica campestris |
title_full | Transcriptome sequencing and gas chromatography–mass spectrometry analyses provide insights into β-caryophyllene biosynthesis in Brassica campestris |
title_fullStr | Transcriptome sequencing and gas chromatography–mass spectrometry analyses provide insights into β-caryophyllene biosynthesis in Brassica campestris |
title_full_unstemmed | Transcriptome sequencing and gas chromatography–mass spectrometry analyses provide insights into β-caryophyllene biosynthesis in Brassica campestris |
title_short | Transcriptome sequencing and gas chromatography–mass spectrometry analyses provide insights into β-caryophyllene biosynthesis in Brassica campestris |
title_sort | transcriptome sequencing and gas chromatography–mass spectrometry analyses provide insights into β-caryophyllene biosynthesis in brassica campestris |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9428917/ https://www.ncbi.nlm.nih.gov/pubmed/36060474 http://dx.doi.org/10.1016/j.fochms.2022.100129 |
work_keys_str_mv | AT wanghaibin transcriptomesequencingandgaschromatographymassspectrometryanalysesprovideinsightsintobcaryophyllenebiosynthesisinbrassicacampestris AT zongchen transcriptomesequencingandgaschromatographymassspectrometryanalysesprovideinsightsintobcaryophyllenebiosynthesisinbrassicacampestris AT baiaimei transcriptomesequencingandgaschromatographymassspectrometryanalysesprovideinsightsintobcaryophyllenebiosynthesisinbrassicacampestris AT yuanshuilin transcriptomesequencingandgaschromatographymassspectrometryanalysesprovideinsightsintobcaryophyllenebiosynthesisinbrassicacampestris AT liyan transcriptomesequencingandgaschromatographymassspectrometryanalysesprovideinsightsintobcaryophyllenebiosynthesisinbrassicacampestris AT yuzhanghong transcriptomesequencingandgaschromatographymassspectrometryanalysesprovideinsightsintobcaryophyllenebiosynthesisinbrassicacampestris AT tianruiping transcriptomesequencingandgaschromatographymassspectrometryanalysesprovideinsightsintobcaryophyllenebiosynthesisinbrassicacampestris AT liutongkun transcriptomesequencingandgaschromatographymassspectrometryanalysesprovideinsightsintobcaryophyllenebiosynthesisinbrassicacampestris AT houxilin transcriptomesequencingandgaschromatographymassspectrometryanalysesprovideinsightsintobcaryophyllenebiosynthesisinbrassicacampestris AT liying transcriptomesequencingandgaschromatographymassspectrometryanalysesprovideinsightsintobcaryophyllenebiosynthesisinbrassicacampestris |