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Isolation and structural comparison of Ru(II)-dnp complexes [dnp = 2,6-bis(1,8-naphthyridin-2-yl)pyridine] with axially or equatorially coordinating NCS ligands
The molecular and crystal structures of two ruthenium(II) complexes, viz. cis-aqua[2,6-bis(1,8-naphthyridin-2-yl)pyridine-κ(3) N,N′,N′′](thiocyanato-κN)(triphenylphosphine-κP)ruthenium(II) hexafluoridophosphate–acetone–water (1/0.5/1), [Ru(NCS)(C(21)H(13)N(5))(C(18)H(15)P)(H(2)O)]PF(6)·0.5C...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Union of Crystallography
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9431777/ https://www.ncbi.nlm.nih.gov/pubmed/36072152 http://dx.doi.org/10.1107/S2056989022004443 |
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author | Takase, Tsugiko Yamanaka, Takashi Tamura, Chihiro Oyama, Dai |
author_facet | Takase, Tsugiko Yamanaka, Takashi Tamura, Chihiro Oyama, Dai |
author_sort | Takase, Tsugiko |
collection | PubMed |
description | The molecular and crystal structures of two ruthenium(II) complexes, viz. cis-aqua[2,6-bis(1,8-naphthyridin-2-yl)pyridine-κ(3) N,N′,N′′](thiocyanato-κN)(triphenylphosphine-κP)ruthenium(II) hexafluoridophosphate–acetone–water (1/0.5/1), [Ru(NCS)(C(21)H(13)N(5))(C(18)H(15)P)(H(2)O)]PF(6)·0.5C(3)H(6)O·H(2)O (I) and trans-[2,6-bis(1,8-naphthyridin-2-yl)pyridine-κ(3)’N,N′,N′′]bis(pyridine-κN)(thiocyanato-κN)ruthenium(II) thiocyanate, [Ru(NCS)(C(21)H(13)N(5))(C(5)H(5)N)(2)]NCS (II), with an N-coordinating thiocyanato group and a tridentate polypyridyl supporting ligand, are reported. The Ru(II) atom in each of the cationic complexes adopts a distorted octahedral coordination sphere, defined by an N atom of the thiocyanato ligand, three N atoms from the tridentate polypyridyl ligand, and an O and P atom in (I) or two pyridine-N atoms in (II) derived from monodentate ligands. The thiocyanato ligand in (I) coordinates in an axial manner to the {Ru-dnp} unit [dnp = 2,6-bis(1,8-naphthyridin-2-yl)pyridine], whereas it coordinates in an equatorial manner in (II). In the crystal structure of compound (I), intramolecular C—H⋯O, C—H⋯N and O—H⋯N hydrogen bonds as well as π–π contacts are present, in addition to intermolecular C—H⋯F, C—H⋯O and O—H⋯O hydrogen bonds. In the crystal structure of compound (II), intramolecular C—H⋯N hydrogen bonds are observed along with intermolecular C—H⋯N and C—H⋯S hydrogen bonds as well as a π–π interaction. |
format | Online Article Text |
id | pubmed-9431777 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-94317772022-09-06 Isolation and structural comparison of Ru(II)-dnp complexes [dnp = 2,6-bis(1,8-naphthyridin-2-yl)pyridine] with axially or equatorially coordinating NCS ligands Takase, Tsugiko Yamanaka, Takashi Tamura, Chihiro Oyama, Dai Acta Crystallogr E Crystallogr Commun Research Communications The molecular and crystal structures of two ruthenium(II) complexes, viz. cis-aqua[2,6-bis(1,8-naphthyridin-2-yl)pyridine-κ(3) N,N′,N′′](thiocyanato-κN)(triphenylphosphine-κP)ruthenium(II) hexafluoridophosphate–acetone–water (1/0.5/1), [Ru(NCS)(C(21)H(13)N(5))(C(18)H(15)P)(H(2)O)]PF(6)·0.5C(3)H(6)O·H(2)O (I) and trans-[2,6-bis(1,8-naphthyridin-2-yl)pyridine-κ(3)’N,N′,N′′]bis(pyridine-κN)(thiocyanato-κN)ruthenium(II) thiocyanate, [Ru(NCS)(C(21)H(13)N(5))(C(5)H(5)N)(2)]NCS (II), with an N-coordinating thiocyanato group and a tridentate polypyridyl supporting ligand, are reported. The Ru(II) atom in each of the cationic complexes adopts a distorted octahedral coordination sphere, defined by an N atom of the thiocyanato ligand, three N atoms from the tridentate polypyridyl ligand, and an O and P atom in (I) or two pyridine-N atoms in (II) derived from monodentate ligands. The thiocyanato ligand in (I) coordinates in an axial manner to the {Ru-dnp} unit [dnp = 2,6-bis(1,8-naphthyridin-2-yl)pyridine], whereas it coordinates in an equatorial manner in (II). In the crystal structure of compound (I), intramolecular C—H⋯O, C—H⋯N and O—H⋯N hydrogen bonds as well as π–π contacts are present, in addition to intermolecular C—H⋯F, C—H⋯O and O—H⋯O hydrogen bonds. In the crystal structure of compound (II), intramolecular C—H⋯N hydrogen bonds are observed along with intermolecular C—H⋯N and C—H⋯S hydrogen bonds as well as a π–π interaction. International Union of Crystallography 2022-05-06 /pmc/articles/PMC9431777/ /pubmed/36072152 http://dx.doi.org/10.1107/S2056989022004443 Text en © Takase et al. 2022 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Communications Takase, Tsugiko Yamanaka, Takashi Tamura, Chihiro Oyama, Dai Isolation and structural comparison of Ru(II)-dnp complexes [dnp = 2,6-bis(1,8-naphthyridin-2-yl)pyridine] with axially or equatorially coordinating NCS ligands |
title | Isolation and structural comparison of Ru(II)-dnp complexes [dnp = 2,6-bis(1,8-naphthyridin-2-yl)pyridine] with axially or equatorially coordinating NCS ligands |
title_full | Isolation and structural comparison of Ru(II)-dnp complexes [dnp = 2,6-bis(1,8-naphthyridin-2-yl)pyridine] with axially or equatorially coordinating NCS ligands |
title_fullStr | Isolation and structural comparison of Ru(II)-dnp complexes [dnp = 2,6-bis(1,8-naphthyridin-2-yl)pyridine] with axially or equatorially coordinating NCS ligands |
title_full_unstemmed | Isolation and structural comparison of Ru(II)-dnp complexes [dnp = 2,6-bis(1,8-naphthyridin-2-yl)pyridine] with axially or equatorially coordinating NCS ligands |
title_short | Isolation and structural comparison of Ru(II)-dnp complexes [dnp = 2,6-bis(1,8-naphthyridin-2-yl)pyridine] with axially or equatorially coordinating NCS ligands |
title_sort | isolation and structural comparison of ru(ii)-dnp complexes [dnp = 2,6-bis(1,8-naphthyridin-2-yl)pyridine] with axially or equatorially coordinating ncs ligands |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9431777/ https://www.ncbi.nlm.nih.gov/pubmed/36072152 http://dx.doi.org/10.1107/S2056989022004443 |
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