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Different conformations and packing motifs in the crystal structures of four thiophene–carbohydrazide–pyridine derivatives
The crystal structures of four thiophene–carbohydrazide–pyridine derivatives, viz. N′-[(E)-pyridin-3-ylmethylidene]thiophene-2-carbohydrazide, C(11)H(9)N(3)OS, (I), N′-[(E)-pyridin-2-ylmethylidene]thiophene-2-carbohydrazide, C(11)H(9)N(3)OS, (II), N-methyl-N′-[(E)-pyridin-2-ylmethylidene]th...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Union of Crystallography
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9431791/ https://www.ncbi.nlm.nih.gov/pubmed/36072151 http://dx.doi.org/10.1107/S2056989022005151 |
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author | Garbutt, Jennifer L. da Costa, Cristiane F. deSouza, Marcus V. N. Wardell, Solange M. S. V. Wardell, James L. Harrison, William T. A. |
author_facet | Garbutt, Jennifer L. da Costa, Cristiane F. deSouza, Marcus V. N. Wardell, Solange M. S. V. Wardell, James L. Harrison, William T. A. |
author_sort | Garbutt, Jennifer L. |
collection | PubMed |
description | The crystal structures of four thiophene–carbohydrazide–pyridine derivatives, viz. N′-[(E)-pyridin-3-ylmethylidene]thiophene-2-carbohydrazide, C(11)H(9)N(3)OS, (I), N′-[(E)-pyridin-2-ylmethylidene]thiophene-2-carbohydrazide, C(11)H(9)N(3)OS, (II), N-methyl-N′-[(E)-pyridin-2-ylmethylidene]thiophene-2-carbohydrazide, C(12)H(11)N(3)OS, (III) and N′-[(E)-pyridin-2-ylmethylidene]-2-(thiophen-2-yl)ethanohydrazide, C(12)H(11)N(3)OS, (IV) are described. The dihedral angles between the thiophene ring and the pyridine ring are 21.4 (2), 15.42 (14), 4.97 (8) and 83.52 (13)° for (I)–(IV), respectively. The thiophene ring in (IV) is disordered over two orientations in a 0.851 (2):0.149 (2) ratio. Key features of the packing include N—H⋯N(p) (p = pyridine) hydrogen bonds in (I), which generate C(7) chains propagating in the [001] direction; N—H⋯N(p) links also feature in (II), but in this case they lead to C(6) [001] chains; in (IV), classical amide (C4) N—H⋯O links result in [010] chains; in every case adjacent molecules in the chains are related by 2(1) screw axes. There are no classical hydrogen bonds in the extended structure of (III). Various weak C—H⋯X (X = O, N, S) interactions occur in each structure, but no aromatic π–π stacking is evident. The Hirshfeld surfaces and fingerprint plots for (I)–(IV) are compared. |
format | Online Article Text |
id | pubmed-9431791 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-94317912022-09-06 Different conformations and packing motifs in the crystal structures of four thiophene–carbohydrazide–pyridine derivatives Garbutt, Jennifer L. da Costa, Cristiane F. deSouza, Marcus V. N. Wardell, Solange M. S. V. Wardell, James L. Harrison, William T. A. Acta Crystallogr E Crystallogr Commun Research Communications The crystal structures of four thiophene–carbohydrazide–pyridine derivatives, viz. N′-[(E)-pyridin-3-ylmethylidene]thiophene-2-carbohydrazide, C(11)H(9)N(3)OS, (I), N′-[(E)-pyridin-2-ylmethylidene]thiophene-2-carbohydrazide, C(11)H(9)N(3)OS, (II), N-methyl-N′-[(E)-pyridin-2-ylmethylidene]thiophene-2-carbohydrazide, C(12)H(11)N(3)OS, (III) and N′-[(E)-pyridin-2-ylmethylidene]-2-(thiophen-2-yl)ethanohydrazide, C(12)H(11)N(3)OS, (IV) are described. The dihedral angles between the thiophene ring and the pyridine ring are 21.4 (2), 15.42 (14), 4.97 (8) and 83.52 (13)° for (I)–(IV), respectively. The thiophene ring in (IV) is disordered over two orientations in a 0.851 (2):0.149 (2) ratio. Key features of the packing include N—H⋯N(p) (p = pyridine) hydrogen bonds in (I), which generate C(7) chains propagating in the [001] direction; N—H⋯N(p) links also feature in (II), but in this case they lead to C(6) [001] chains; in (IV), classical amide (C4) N—H⋯O links result in [010] chains; in every case adjacent molecules in the chains are related by 2(1) screw axes. There are no classical hydrogen bonds in the extended structure of (III). Various weak C—H⋯X (X = O, N, S) interactions occur in each structure, but no aromatic π–π stacking is evident. The Hirshfeld surfaces and fingerprint plots for (I)–(IV) are compared. International Union of Crystallography 2022-05-17 /pmc/articles/PMC9431791/ /pubmed/36072151 http://dx.doi.org/10.1107/S2056989022005151 Text en © Garbutt et al. 2022 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Communications Garbutt, Jennifer L. da Costa, Cristiane F. deSouza, Marcus V. N. Wardell, Solange M. S. V. Wardell, James L. Harrison, William T. A. Different conformations and packing motifs in the crystal structures of four thiophene–carbohydrazide–pyridine derivatives |
title | Different conformations and packing motifs in the crystal structures of four thiophene–carbohydrazide–pyridine derivatives |
title_full | Different conformations and packing motifs in the crystal structures of four thiophene–carbohydrazide–pyridine derivatives |
title_fullStr | Different conformations and packing motifs in the crystal structures of four thiophene–carbohydrazide–pyridine derivatives |
title_full_unstemmed | Different conformations and packing motifs in the crystal structures of four thiophene–carbohydrazide–pyridine derivatives |
title_short | Different conformations and packing motifs in the crystal structures of four thiophene–carbohydrazide–pyridine derivatives |
title_sort | different conformations and packing motifs in the crystal structures of four thiophene–carbohydrazide–pyridine derivatives |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9431791/ https://www.ncbi.nlm.nih.gov/pubmed/36072151 http://dx.doi.org/10.1107/S2056989022005151 |
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