Cargando…
Characterisation of a soil MINPP phytase with remarkable long-term stability and activity from Acinetobacter sp.
Phylogenetic analysis, homology modelling and biochemical methods have been employed to characterize a phytase from a Gram-negative soil bacterium. Acinetobacter sp. AC1-2 phytase belongs to clade 2 of the histidine (acid) phytases, to the Multiple Inositol Polyphosphate Phosphatase (MINPP) subclass...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9432691/ https://www.ncbi.nlm.nih.gov/pubmed/36044476 http://dx.doi.org/10.1371/journal.pone.0272015 |
_version_ | 1784780440623644672 |
---|---|
author | Rix, Gregory D. Sprigg, Colleen Whitfield, Hayley Hemmings, Andrew M. Todd, Jonathan D. Brearley, Charles A. |
author_facet | Rix, Gregory D. Sprigg, Colleen Whitfield, Hayley Hemmings, Andrew M. Todd, Jonathan D. Brearley, Charles A. |
author_sort | Rix, Gregory D. |
collection | PubMed |
description | Phylogenetic analysis, homology modelling and biochemical methods have been employed to characterize a phytase from a Gram-negative soil bacterium. Acinetobacter sp. AC1-2 phytase belongs to clade 2 of the histidine (acid) phytases, to the Multiple Inositol Polyphosphate Phosphatase (MINPP) subclass. The enzyme was extraordinarily stable in solution both at room temperature and 4°C, retaining near 100% activity over 755 days. It showed a broad pH activity profile from 2–8.5 with maxima at 3, 4.5–5 and 6. The enzyme showed Michaelis-Menten kinetics and substrate inhibition (V(max), K(m), and K(i), 228 U/mg, 0.65 mM and 2.23 mM, respectively). Homology modelling using the crystal structure of a homologous MINPP from a human gut commensal bacterium indicated the presence of a potentially stabilising polypeptide loop (a U-loop) straddling the active site. By employ of the enantiospecificity of Arabidopsis inositol tris/tetrakisphosphate kinase 1 for inositol pentakisphosphates, we show AC1-2 MINPP to possess D6-phytase activity, which allowed modelling of active site specificity pockets for InsP(6) substrate. While phytase gene transcription was unaltered in rich media, it was repressed in minimal media with phytic acid and orthophosphate as phosphate sources. The results of this study reveal AC1-2 MINPP to possess desirable attributes relevant to biotechnological use. |
format | Online Article Text |
id | pubmed-9432691 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-94326912022-09-01 Characterisation of a soil MINPP phytase with remarkable long-term stability and activity from Acinetobacter sp. Rix, Gregory D. Sprigg, Colleen Whitfield, Hayley Hemmings, Andrew M. Todd, Jonathan D. Brearley, Charles A. PLoS One Research Article Phylogenetic analysis, homology modelling and biochemical methods have been employed to characterize a phytase from a Gram-negative soil bacterium. Acinetobacter sp. AC1-2 phytase belongs to clade 2 of the histidine (acid) phytases, to the Multiple Inositol Polyphosphate Phosphatase (MINPP) subclass. The enzyme was extraordinarily stable in solution both at room temperature and 4°C, retaining near 100% activity over 755 days. It showed a broad pH activity profile from 2–8.5 with maxima at 3, 4.5–5 and 6. The enzyme showed Michaelis-Menten kinetics and substrate inhibition (V(max), K(m), and K(i), 228 U/mg, 0.65 mM and 2.23 mM, respectively). Homology modelling using the crystal structure of a homologous MINPP from a human gut commensal bacterium indicated the presence of a potentially stabilising polypeptide loop (a U-loop) straddling the active site. By employ of the enantiospecificity of Arabidopsis inositol tris/tetrakisphosphate kinase 1 for inositol pentakisphosphates, we show AC1-2 MINPP to possess D6-phytase activity, which allowed modelling of active site specificity pockets for InsP(6) substrate. While phytase gene transcription was unaltered in rich media, it was repressed in minimal media with phytic acid and orthophosphate as phosphate sources. The results of this study reveal AC1-2 MINPP to possess desirable attributes relevant to biotechnological use. Public Library of Science 2022-08-31 /pmc/articles/PMC9432691/ /pubmed/36044476 http://dx.doi.org/10.1371/journal.pone.0272015 Text en © 2022 Rix et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Rix, Gregory D. Sprigg, Colleen Whitfield, Hayley Hemmings, Andrew M. Todd, Jonathan D. Brearley, Charles A. Characterisation of a soil MINPP phytase with remarkable long-term stability and activity from Acinetobacter sp. |
title | Characterisation of a soil MINPP phytase with remarkable long-term stability and activity from Acinetobacter sp. |
title_full | Characterisation of a soil MINPP phytase with remarkable long-term stability and activity from Acinetobacter sp. |
title_fullStr | Characterisation of a soil MINPP phytase with remarkable long-term stability and activity from Acinetobacter sp. |
title_full_unstemmed | Characterisation of a soil MINPP phytase with remarkable long-term stability and activity from Acinetobacter sp. |
title_short | Characterisation of a soil MINPP phytase with remarkable long-term stability and activity from Acinetobacter sp. |
title_sort | characterisation of a soil minpp phytase with remarkable long-term stability and activity from acinetobacter sp. |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9432691/ https://www.ncbi.nlm.nih.gov/pubmed/36044476 http://dx.doi.org/10.1371/journal.pone.0272015 |
work_keys_str_mv | AT rixgregoryd characterisationofasoilminppphytasewithremarkablelongtermstabilityandactivityfromacinetobactersp AT spriggcolleen characterisationofasoilminppphytasewithremarkablelongtermstabilityandactivityfromacinetobactersp AT whitfieldhayley characterisationofasoilminppphytasewithremarkablelongtermstabilityandactivityfromacinetobactersp AT hemmingsandrewm characterisationofasoilminppphytasewithremarkablelongtermstabilityandactivityfromacinetobactersp AT toddjonathand characterisationofasoilminppphytasewithremarkablelongtermstabilityandactivityfromacinetobactersp AT brearleycharlesa characterisationofasoilminppphytasewithremarkablelongtermstabilityandactivityfromacinetobactersp |