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Characterisation of a soil MINPP phytase with remarkable long-term stability and activity from Acinetobacter sp.

Phylogenetic analysis, homology modelling and biochemical methods have been employed to characterize a phytase from a Gram-negative soil bacterium. Acinetobacter sp. AC1-2 phytase belongs to clade 2 of the histidine (acid) phytases, to the Multiple Inositol Polyphosphate Phosphatase (MINPP) subclass...

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Autores principales: Rix, Gregory D., Sprigg, Colleen, Whitfield, Hayley, Hemmings, Andrew M., Todd, Jonathan D., Brearley, Charles A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9432691/
https://www.ncbi.nlm.nih.gov/pubmed/36044476
http://dx.doi.org/10.1371/journal.pone.0272015
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author Rix, Gregory D.
Sprigg, Colleen
Whitfield, Hayley
Hemmings, Andrew M.
Todd, Jonathan D.
Brearley, Charles A.
author_facet Rix, Gregory D.
Sprigg, Colleen
Whitfield, Hayley
Hemmings, Andrew M.
Todd, Jonathan D.
Brearley, Charles A.
author_sort Rix, Gregory D.
collection PubMed
description Phylogenetic analysis, homology modelling and biochemical methods have been employed to characterize a phytase from a Gram-negative soil bacterium. Acinetobacter sp. AC1-2 phytase belongs to clade 2 of the histidine (acid) phytases, to the Multiple Inositol Polyphosphate Phosphatase (MINPP) subclass. The enzyme was extraordinarily stable in solution both at room temperature and 4°C, retaining near 100% activity over 755 days. It showed a broad pH activity profile from 2–8.5 with maxima at 3, 4.5–5 and 6. The enzyme showed Michaelis-Menten kinetics and substrate inhibition (V(max), K(m), and K(i), 228 U/mg, 0.65 mM and 2.23 mM, respectively). Homology modelling using the crystal structure of a homologous MINPP from a human gut commensal bacterium indicated the presence of a potentially stabilising polypeptide loop (a U-loop) straddling the active site. By employ of the enantiospecificity of Arabidopsis inositol tris/tetrakisphosphate kinase 1 for inositol pentakisphosphates, we show AC1-2 MINPP to possess D6-phytase activity, which allowed modelling of active site specificity pockets for InsP(6) substrate. While phytase gene transcription was unaltered in rich media, it was repressed in minimal media with phytic acid and orthophosphate as phosphate sources. The results of this study reveal AC1-2 MINPP to possess desirable attributes relevant to biotechnological use.
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spelling pubmed-94326912022-09-01 Characterisation of a soil MINPP phytase with remarkable long-term stability and activity from Acinetobacter sp. Rix, Gregory D. Sprigg, Colleen Whitfield, Hayley Hemmings, Andrew M. Todd, Jonathan D. Brearley, Charles A. PLoS One Research Article Phylogenetic analysis, homology modelling and biochemical methods have been employed to characterize a phytase from a Gram-negative soil bacterium. Acinetobacter sp. AC1-2 phytase belongs to clade 2 of the histidine (acid) phytases, to the Multiple Inositol Polyphosphate Phosphatase (MINPP) subclass. The enzyme was extraordinarily stable in solution both at room temperature and 4°C, retaining near 100% activity over 755 days. It showed a broad pH activity profile from 2–8.5 with maxima at 3, 4.5–5 and 6. The enzyme showed Michaelis-Menten kinetics and substrate inhibition (V(max), K(m), and K(i), 228 U/mg, 0.65 mM and 2.23 mM, respectively). Homology modelling using the crystal structure of a homologous MINPP from a human gut commensal bacterium indicated the presence of a potentially stabilising polypeptide loop (a U-loop) straddling the active site. By employ of the enantiospecificity of Arabidopsis inositol tris/tetrakisphosphate kinase 1 for inositol pentakisphosphates, we show AC1-2 MINPP to possess D6-phytase activity, which allowed modelling of active site specificity pockets for InsP(6) substrate. While phytase gene transcription was unaltered in rich media, it was repressed in minimal media with phytic acid and orthophosphate as phosphate sources. The results of this study reveal AC1-2 MINPP to possess desirable attributes relevant to biotechnological use. Public Library of Science 2022-08-31 /pmc/articles/PMC9432691/ /pubmed/36044476 http://dx.doi.org/10.1371/journal.pone.0272015 Text en © 2022 Rix et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Rix, Gregory D.
Sprigg, Colleen
Whitfield, Hayley
Hemmings, Andrew M.
Todd, Jonathan D.
Brearley, Charles A.
Characterisation of a soil MINPP phytase with remarkable long-term stability and activity from Acinetobacter sp.
title Characterisation of a soil MINPP phytase with remarkable long-term stability and activity from Acinetobacter sp.
title_full Characterisation of a soil MINPP phytase with remarkable long-term stability and activity from Acinetobacter sp.
title_fullStr Characterisation of a soil MINPP phytase with remarkable long-term stability and activity from Acinetobacter sp.
title_full_unstemmed Characterisation of a soil MINPP phytase with remarkable long-term stability and activity from Acinetobacter sp.
title_short Characterisation of a soil MINPP phytase with remarkable long-term stability and activity from Acinetobacter sp.
title_sort characterisation of a soil minpp phytase with remarkable long-term stability and activity from acinetobacter sp.
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9432691/
https://www.ncbi.nlm.nih.gov/pubmed/36044476
http://dx.doi.org/10.1371/journal.pone.0272015
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