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New rapid detection by using a constant temperature method for avian leukosis viruses

The avian leukemia virus causes avian leukemia (AL), a severe immunosuppressive disease in chickens (ALV). Since the 1990s, the diversity of ALV subpopulations caused by ALV genome variation and recombination, and the complexity of the infection and transmission, with currently no effective commerci...

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Autores principales: Wu, Xiuhong, Chu, Fengsheng, Zhang, Luxuan, Chen, Sheng, Gao, Liguo, Zhang, Hao, Huang, Haohua, Wang, Jin, Chen, Mengjun, Xie, Zi, Chen, Feng, Zhang, Xinheng, Xie, Qingmei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9433894/
https://www.ncbi.nlm.nih.gov/pubmed/36060773
http://dx.doi.org/10.3389/fmicb.2022.968559
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author Wu, Xiuhong
Chu, Fengsheng
Zhang, Luxuan
Chen, Sheng
Gao, Liguo
Zhang, Hao
Huang, Haohua
Wang, Jin
Chen, Mengjun
Xie, Zi
Chen, Feng
Zhang, Xinheng
Xie, Qingmei
author_facet Wu, Xiuhong
Chu, Fengsheng
Zhang, Luxuan
Chen, Sheng
Gao, Liguo
Zhang, Hao
Huang, Haohua
Wang, Jin
Chen, Mengjun
Xie, Zi
Chen, Feng
Zhang, Xinheng
Xie, Qingmei
author_sort Wu, Xiuhong
collection PubMed
description The avian leukemia virus causes avian leukemia (AL), a severe immunosuppressive disease in chickens (ALV). Since the 1990s, the diversity of ALV subpopulations caused by ALV genome variation and recombination, and the complexity of the infection and transmission, with currently no effective commercial vaccine and therapeutic for ALV, has resulted in severe economic losses to the chicken business in various parts of the world. Therefore, as a key means of prevention and control, an effective, rapid, and accurate detection method is imperative. A new real-time reverse transcription recombinase-aided amplification (RT-RAA) assay for ALV with rapid, highly specific, low-cost, and simple operational characteristics have been developed in this study. Based on the amplification of 114 base pairs from the ALV P12 gene, real-time RT-RAA primers and a probe were designed for this study. The lowest detection line was 10 copies of ALV RNA molecules per response, which could be carried out at 39°C in as fastest as 5 min and completed in 30 min, with no cross-reactivity with Marek's disease virus, avian reticuloendothelial virus, Newcastle disease virus, infectious bronchitis virus, infectious bursal disease virus, infectious laryngotracheitis virus, and avian influenza virus. Furthermore, the kappa value of 0.91 (>0.81) was compared with reverse transcription–polymerase chain reaction (RT-PCR) for 44 clinical samples, and the coefficients of variation were within 5.18% of the repeated assays with three low-level concentration gradients. These results indicate that using a real-time RT-RAA assay to detect ALV could be a valuable method.
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spelling pubmed-94338942022-09-02 New rapid detection by using a constant temperature method for avian leukosis viruses Wu, Xiuhong Chu, Fengsheng Zhang, Luxuan Chen, Sheng Gao, Liguo Zhang, Hao Huang, Haohua Wang, Jin Chen, Mengjun Xie, Zi Chen, Feng Zhang, Xinheng Xie, Qingmei Front Microbiol Microbiology The avian leukemia virus causes avian leukemia (AL), a severe immunosuppressive disease in chickens (ALV). Since the 1990s, the diversity of ALV subpopulations caused by ALV genome variation and recombination, and the complexity of the infection and transmission, with currently no effective commercial vaccine and therapeutic for ALV, has resulted in severe economic losses to the chicken business in various parts of the world. Therefore, as a key means of prevention and control, an effective, rapid, and accurate detection method is imperative. A new real-time reverse transcription recombinase-aided amplification (RT-RAA) assay for ALV with rapid, highly specific, low-cost, and simple operational characteristics have been developed in this study. Based on the amplification of 114 base pairs from the ALV P12 gene, real-time RT-RAA primers and a probe were designed for this study. The lowest detection line was 10 copies of ALV RNA molecules per response, which could be carried out at 39°C in as fastest as 5 min and completed in 30 min, with no cross-reactivity with Marek's disease virus, avian reticuloendothelial virus, Newcastle disease virus, infectious bronchitis virus, infectious bursal disease virus, infectious laryngotracheitis virus, and avian influenza virus. Furthermore, the kappa value of 0.91 (>0.81) was compared with reverse transcription–polymerase chain reaction (RT-PCR) for 44 clinical samples, and the coefficients of variation were within 5.18% of the repeated assays with three low-level concentration gradients. These results indicate that using a real-time RT-RAA assay to detect ALV could be a valuable method. Frontiers Media S.A. 2022-08-18 /pmc/articles/PMC9433894/ /pubmed/36060773 http://dx.doi.org/10.3389/fmicb.2022.968559 Text en Copyright © 2022 Wu, Chu, Zhang, Chen, Gao, Zhang, Huang, Wang, Chen, Xie, Chen, Zhang and Xie. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Wu, Xiuhong
Chu, Fengsheng
Zhang, Luxuan
Chen, Sheng
Gao, Liguo
Zhang, Hao
Huang, Haohua
Wang, Jin
Chen, Mengjun
Xie, Zi
Chen, Feng
Zhang, Xinheng
Xie, Qingmei
New rapid detection by using a constant temperature method for avian leukosis viruses
title New rapid detection by using a constant temperature method for avian leukosis viruses
title_full New rapid detection by using a constant temperature method for avian leukosis viruses
title_fullStr New rapid detection by using a constant temperature method for avian leukosis viruses
title_full_unstemmed New rapid detection by using a constant temperature method for avian leukosis viruses
title_short New rapid detection by using a constant temperature method for avian leukosis viruses
title_sort new rapid detection by using a constant temperature method for avian leukosis viruses
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9433894/
https://www.ncbi.nlm.nih.gov/pubmed/36060773
http://dx.doi.org/10.3389/fmicb.2022.968559
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