Cargando…

Accelerating the discovery of rare tree species in Amazonian forests: integrating long monitoring tree plot data with metabolomics and phylogenetics for the description of a new species in the hyperdiverse genus Inga Mill

In species-rich regions and highly speciose genera, the need for species identification and taxonomic recognition has led to the development of emergent technologies. Here, we combine long-term plot data with untargated metabolomics, and morphological and phylogenetic data to describe a new rare spe...

Descripción completa

Detalles Bibliográficos
Autores principales: Guevara Andino, Juan Ernesto, Hernández, Consuelo, Valencia, Renato, Forrister, Dale, Endara, María-José
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9435521/
https://www.ncbi.nlm.nih.gov/pubmed/36061752
http://dx.doi.org/10.7717/peerj.13767
_version_ 1784781160458485760
author Guevara Andino, Juan Ernesto
Hernández, Consuelo
Valencia, Renato
Forrister, Dale
Endara, María-José
author_facet Guevara Andino, Juan Ernesto
Hernández, Consuelo
Valencia, Renato
Forrister, Dale
Endara, María-José
author_sort Guevara Andino, Juan Ernesto
collection PubMed
description In species-rich regions and highly speciose genera, the need for species identification and taxonomic recognition has led to the development of emergent technologies. Here, we combine long-term plot data with untargated metabolomics, and morphological and phylogenetic data to describe a new rare species in the hyperdiverse genus of trees Inga Mill. Our combined data show that Inga coleyana is a new lineage splitting from their closest relatives I. coruscans and I. cylindrica. Moreover, analyses of the chemical defensive profile demonstrate that I. coleyana has a very distinctive chemistry from their closest relatives, with I. coleyana having a chemistry based on saponins and I. cylindrica and I. coruscans producing a series of dihydroflavonols in addition to saponins. Finally, data from our network of plots suggest that I. coleyana is a rare and probably endemic taxon in the hyper-diverse genus Inga. Thus, the synergy produced by different approaches, such as long-term plot data and metabolomics, could accelerate taxonomic recognition in challenging tropical biomes.
format Online
Article
Text
id pubmed-9435521
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher PeerJ Inc.
record_format MEDLINE/PubMed
spelling pubmed-94355212022-09-02 Accelerating the discovery of rare tree species in Amazonian forests: integrating long monitoring tree plot data with metabolomics and phylogenetics for the description of a new species in the hyperdiverse genus Inga Mill Guevara Andino, Juan Ernesto Hernández, Consuelo Valencia, Renato Forrister, Dale Endara, María-José PeerJ Biodiversity In species-rich regions and highly speciose genera, the need for species identification and taxonomic recognition has led to the development of emergent technologies. Here, we combine long-term plot data with untargated metabolomics, and morphological and phylogenetic data to describe a new rare species in the hyperdiverse genus of trees Inga Mill. Our combined data show that Inga coleyana is a new lineage splitting from their closest relatives I. coruscans and I. cylindrica. Moreover, analyses of the chemical defensive profile demonstrate that I. coleyana has a very distinctive chemistry from their closest relatives, with I. coleyana having a chemistry based on saponins and I. cylindrica and I. coruscans producing a series of dihydroflavonols in addition to saponins. Finally, data from our network of plots suggest that I. coleyana is a rare and probably endemic taxon in the hyper-diverse genus Inga. Thus, the synergy produced by different approaches, such as long-term plot data and metabolomics, could accelerate taxonomic recognition in challenging tropical biomes. PeerJ Inc. 2022-08-29 /pmc/articles/PMC9435521/ /pubmed/36061752 http://dx.doi.org/10.7717/peerj.13767 Text en ©2022 Guevara Andino et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Biodiversity
Guevara Andino, Juan Ernesto
Hernández, Consuelo
Valencia, Renato
Forrister, Dale
Endara, María-José
Accelerating the discovery of rare tree species in Amazonian forests: integrating long monitoring tree plot data with metabolomics and phylogenetics for the description of a new species in the hyperdiverse genus Inga Mill
title Accelerating the discovery of rare tree species in Amazonian forests: integrating long monitoring tree plot data with metabolomics and phylogenetics for the description of a new species in the hyperdiverse genus Inga Mill
title_full Accelerating the discovery of rare tree species in Amazonian forests: integrating long monitoring tree plot data with metabolomics and phylogenetics for the description of a new species in the hyperdiverse genus Inga Mill
title_fullStr Accelerating the discovery of rare tree species in Amazonian forests: integrating long monitoring tree plot data with metabolomics and phylogenetics for the description of a new species in the hyperdiverse genus Inga Mill
title_full_unstemmed Accelerating the discovery of rare tree species in Amazonian forests: integrating long monitoring tree plot data with metabolomics and phylogenetics for the description of a new species in the hyperdiverse genus Inga Mill
title_short Accelerating the discovery of rare tree species in Amazonian forests: integrating long monitoring tree plot data with metabolomics and phylogenetics for the description of a new species in the hyperdiverse genus Inga Mill
title_sort accelerating the discovery of rare tree species in amazonian forests: integrating long monitoring tree plot data with metabolomics and phylogenetics for the description of a new species in the hyperdiverse genus inga mill
topic Biodiversity
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9435521/
https://www.ncbi.nlm.nih.gov/pubmed/36061752
http://dx.doi.org/10.7717/peerj.13767
work_keys_str_mv AT guevaraandinojuanernesto acceleratingthediscoveryofraretreespeciesinamazonianforestsintegratinglongmonitoringtreeplotdatawithmetabolomicsandphylogeneticsforthedescriptionofanewspeciesinthehyperdiversegenusingamill
AT hernandezconsuelo acceleratingthediscoveryofraretreespeciesinamazonianforestsintegratinglongmonitoringtreeplotdatawithmetabolomicsandphylogeneticsforthedescriptionofanewspeciesinthehyperdiversegenusingamill
AT valenciarenato acceleratingthediscoveryofraretreespeciesinamazonianforestsintegratinglongmonitoringtreeplotdatawithmetabolomicsandphylogeneticsforthedescriptionofanewspeciesinthehyperdiversegenusingamill
AT forristerdale acceleratingthediscoveryofraretreespeciesinamazonianforestsintegratinglongmonitoringtreeplotdatawithmetabolomicsandphylogeneticsforthedescriptionofanewspeciesinthehyperdiversegenusingamill
AT endaramariajose acceleratingthediscoveryofraretreespeciesinamazonianforestsintegratinglongmonitoringtreeplotdatawithmetabolomicsandphylogeneticsforthedescriptionofanewspeciesinthehyperdiversegenusingamill