Cargando…

Identification of a prognostic model based on costimulatory molecule-related subtypes and characterization of tumor microenvironment infiltration in acute myeloid leukemia

Costimulatory molecules have been found to play significant roles in anti-tumor immune responses, and are deemed to serve as promising targets for adjunctive cancer immunotherapies. However, the roles of costimulatory molecule-related genes (CMRGs) in the tumor microenvironment (TME) of acute myeloi...

Descripción completa

Detalles Bibliográficos
Autores principales: Mao, Yan, Hu, Zhengyun, Xu, Xuejiao, Xu, Jinwen, Wu, Chuyan, Jiang, Feng, Zhou, Guoping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9437340/
https://www.ncbi.nlm.nih.gov/pubmed/36061194
http://dx.doi.org/10.3389/fgene.2022.973319
_version_ 1784781584828727296
author Mao, Yan
Hu, Zhengyun
Xu, Xuejiao
Xu, Jinwen
Wu, Chuyan
Jiang, Feng
Zhou, Guoping
author_facet Mao, Yan
Hu, Zhengyun
Xu, Xuejiao
Xu, Jinwen
Wu, Chuyan
Jiang, Feng
Zhou, Guoping
author_sort Mao, Yan
collection PubMed
description Costimulatory molecules have been found to play significant roles in anti-tumor immune responses, and are deemed to serve as promising targets for adjunctive cancer immunotherapies. However, the roles of costimulatory molecule-related genes (CMRGs) in the tumor microenvironment (TME) of acute myeloid leukemia (AML) remain unclear. In this study, we described the CMRG alterations in the genetic and transcriptional fields in AML samples chosen from two datasets. We next evaluated their expression and identified two distinct costimulatory molecule subtypes, which showed that the alterations of CMRGs related to clinical features, immune cell infiltration, and prognosis of patients with AML. Then, a costimulatory molecule-based signature for predicting the overall survival of AML patients was constructed, and the predictive capability of the proposed signature was validated in AML patients. Moreover, the constructed costimulatory molecule risk model was significantly associated with chemotherapeutic drug sensitivity of AML patients. In addition, the identified genes in the proposed prognostic signature might play roles in pediatric AML. CMRGs were found to be potentially important in the AML through our comprehensive analysis. These findings may contribute to improving our understanding of CMRGs in patients with AML, as well as provide new opportunities to assess prognosis and develop more effective immunotherapies.
format Online
Article
Text
id pubmed-9437340
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-94373402022-09-03 Identification of a prognostic model based on costimulatory molecule-related subtypes and characterization of tumor microenvironment infiltration in acute myeloid leukemia Mao, Yan Hu, Zhengyun Xu, Xuejiao Xu, Jinwen Wu, Chuyan Jiang, Feng Zhou, Guoping Front Genet Genetics Costimulatory molecules have been found to play significant roles in anti-tumor immune responses, and are deemed to serve as promising targets for adjunctive cancer immunotherapies. However, the roles of costimulatory molecule-related genes (CMRGs) in the tumor microenvironment (TME) of acute myeloid leukemia (AML) remain unclear. In this study, we described the CMRG alterations in the genetic and transcriptional fields in AML samples chosen from two datasets. We next evaluated their expression and identified two distinct costimulatory molecule subtypes, which showed that the alterations of CMRGs related to clinical features, immune cell infiltration, and prognosis of patients with AML. Then, a costimulatory molecule-based signature for predicting the overall survival of AML patients was constructed, and the predictive capability of the proposed signature was validated in AML patients. Moreover, the constructed costimulatory molecule risk model was significantly associated with chemotherapeutic drug sensitivity of AML patients. In addition, the identified genes in the proposed prognostic signature might play roles in pediatric AML. CMRGs were found to be potentially important in the AML through our comprehensive analysis. These findings may contribute to improving our understanding of CMRGs in patients with AML, as well as provide new opportunities to assess prognosis and develop more effective immunotherapies. Frontiers Media S.A. 2022-08-19 /pmc/articles/PMC9437340/ /pubmed/36061194 http://dx.doi.org/10.3389/fgene.2022.973319 Text en Copyright © 2022 Mao, Hu, Xu, Xu, Wu, Jiang and Zhou. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Mao, Yan
Hu, Zhengyun
Xu, Xuejiao
Xu, Jinwen
Wu, Chuyan
Jiang, Feng
Zhou, Guoping
Identification of a prognostic model based on costimulatory molecule-related subtypes and characterization of tumor microenvironment infiltration in acute myeloid leukemia
title Identification of a prognostic model based on costimulatory molecule-related subtypes and characterization of tumor microenvironment infiltration in acute myeloid leukemia
title_full Identification of a prognostic model based on costimulatory molecule-related subtypes and characterization of tumor microenvironment infiltration in acute myeloid leukemia
title_fullStr Identification of a prognostic model based on costimulatory molecule-related subtypes and characterization of tumor microenvironment infiltration in acute myeloid leukemia
title_full_unstemmed Identification of a prognostic model based on costimulatory molecule-related subtypes and characterization of tumor microenvironment infiltration in acute myeloid leukemia
title_short Identification of a prognostic model based on costimulatory molecule-related subtypes and characterization of tumor microenvironment infiltration in acute myeloid leukemia
title_sort identification of a prognostic model based on costimulatory molecule-related subtypes and characterization of tumor microenvironment infiltration in acute myeloid leukemia
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9437340/
https://www.ncbi.nlm.nih.gov/pubmed/36061194
http://dx.doi.org/10.3389/fgene.2022.973319
work_keys_str_mv AT maoyan identificationofaprognosticmodelbasedoncostimulatorymoleculerelatedsubtypesandcharacterizationoftumormicroenvironmentinfiltrationinacutemyeloidleukemia
AT huzhengyun identificationofaprognosticmodelbasedoncostimulatorymoleculerelatedsubtypesandcharacterizationoftumormicroenvironmentinfiltrationinacutemyeloidleukemia
AT xuxuejiao identificationofaprognosticmodelbasedoncostimulatorymoleculerelatedsubtypesandcharacterizationoftumormicroenvironmentinfiltrationinacutemyeloidleukemia
AT xujinwen identificationofaprognosticmodelbasedoncostimulatorymoleculerelatedsubtypesandcharacterizationoftumormicroenvironmentinfiltrationinacutemyeloidleukemia
AT wuchuyan identificationofaprognosticmodelbasedoncostimulatorymoleculerelatedsubtypesandcharacterizationoftumormicroenvironmentinfiltrationinacutemyeloidleukemia
AT jiangfeng identificationofaprognosticmodelbasedoncostimulatorymoleculerelatedsubtypesandcharacterizationoftumormicroenvironmentinfiltrationinacutemyeloidleukemia
AT zhouguoping identificationofaprognosticmodelbasedoncostimulatorymoleculerelatedsubtypesandcharacterizationoftumormicroenvironmentinfiltrationinacutemyeloidleukemia