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Pyroptosis-related gene-based prognostic signature for predicting the overall survival of oral squamous cell carcinoma patients
PURPOSE: Oral squamous cell carcinoma (OSCC) is the most common oral cancer worldwide. Pyroptosis is a type of programmed cell death mediated by caspase, accompanied by an inflammatory response, and plays an important role in cancer progression. The purpose of this study was to explore and identify...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9437919/ https://www.ncbi.nlm.nih.gov/pubmed/36061051 http://dx.doi.org/10.3389/fsurg.2022.903271 |
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author | Zeng, Deliang Wang, Xiao Zhang, Shuning Zheng, Ao Huang, Qingfeng Cao, Lingyan |
author_facet | Zeng, Deliang Wang, Xiao Zhang, Shuning Zheng, Ao Huang, Qingfeng Cao, Lingyan |
author_sort | Zeng, Deliang |
collection | PubMed |
description | PURPOSE: Oral squamous cell carcinoma (OSCC) is the most common oral cancer worldwide. Pyroptosis is a type of programmed cell death mediated by caspase, accompanied by an inflammatory response, and plays an important role in cancer progression. The purpose of this study was to explore and identify potential biomarkers and further elucidate the potential role of cell pyroptosis in OSCC. METHODS: We regarded the samples from The Cancer Genome Atlas database as a training dataset, screened differentially expressed genes (DEGs), and further screened out OSCC phenotypic characteristic genes by using weighted gene co-expression network analysis. The analysis of 42 known pyroptosis-related genes showed that Psuch genes were widely expressed, mutated, and methylated in OSCC samples. RESULTS: Through correlation analysis, we identified our OSCC pyroptosis-related DEGs. To further evaluate the prognostic value of pyroptosis-related regulators, we constructed a seven gene-based prognostic signature using Cox univariate analysis and least absolute shrinkage and selection operator Cox regression analysis. Meanwhile, we found that patients in the low-risk group had higher immune infiltration. Moreover, our results also indicated significant differences in sensitivity to cisplatin and gefitinib between the high-risk and low-risk groups. CONCLUSION: Our study successfully constructed the pyroptosis-related prognostic signature, which might play a potential prediction role in OSCC prognosis. Our findings also suggested that pyroptosis-related regulators might be novel biomarkers for tumor diagnosis and treatment in OSCC. |
format | Online Article Text |
id | pubmed-9437919 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-94379192022-09-03 Pyroptosis-related gene-based prognostic signature for predicting the overall survival of oral squamous cell carcinoma patients Zeng, Deliang Wang, Xiao Zhang, Shuning Zheng, Ao Huang, Qingfeng Cao, Lingyan Front Surg Surgery PURPOSE: Oral squamous cell carcinoma (OSCC) is the most common oral cancer worldwide. Pyroptosis is a type of programmed cell death mediated by caspase, accompanied by an inflammatory response, and plays an important role in cancer progression. The purpose of this study was to explore and identify potential biomarkers and further elucidate the potential role of cell pyroptosis in OSCC. METHODS: We regarded the samples from The Cancer Genome Atlas database as a training dataset, screened differentially expressed genes (DEGs), and further screened out OSCC phenotypic characteristic genes by using weighted gene co-expression network analysis. The analysis of 42 known pyroptosis-related genes showed that Psuch genes were widely expressed, mutated, and methylated in OSCC samples. RESULTS: Through correlation analysis, we identified our OSCC pyroptosis-related DEGs. To further evaluate the prognostic value of pyroptosis-related regulators, we constructed a seven gene-based prognostic signature using Cox univariate analysis and least absolute shrinkage and selection operator Cox regression analysis. Meanwhile, we found that patients in the low-risk group had higher immune infiltration. Moreover, our results also indicated significant differences in sensitivity to cisplatin and gefitinib between the high-risk and low-risk groups. CONCLUSION: Our study successfully constructed the pyroptosis-related prognostic signature, which might play a potential prediction role in OSCC prognosis. Our findings also suggested that pyroptosis-related regulators might be novel biomarkers for tumor diagnosis and treatment in OSCC. Frontiers Media S.A. 2022-08-19 /pmc/articles/PMC9437919/ /pubmed/36061051 http://dx.doi.org/10.3389/fsurg.2022.903271 Text en © 2022 Zeng, Wang, Zhang, Zheng, Huang and Cao. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY) (https://creativecommons.org/licenses/by/4.0/) . The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Surgery Zeng, Deliang Wang, Xiao Zhang, Shuning Zheng, Ao Huang, Qingfeng Cao, Lingyan Pyroptosis-related gene-based prognostic signature for predicting the overall survival of oral squamous cell carcinoma patients |
title | Pyroptosis-related gene-based prognostic signature for predicting the overall survival of oral squamous cell carcinoma patients |
title_full | Pyroptosis-related gene-based prognostic signature for predicting the overall survival of oral squamous cell carcinoma patients |
title_fullStr | Pyroptosis-related gene-based prognostic signature for predicting the overall survival of oral squamous cell carcinoma patients |
title_full_unstemmed | Pyroptosis-related gene-based prognostic signature for predicting the overall survival of oral squamous cell carcinoma patients |
title_short | Pyroptosis-related gene-based prognostic signature for predicting the overall survival of oral squamous cell carcinoma patients |
title_sort | pyroptosis-related gene-based prognostic signature for predicting the overall survival of oral squamous cell carcinoma patients |
topic | Surgery |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9437919/ https://www.ncbi.nlm.nih.gov/pubmed/36061051 http://dx.doi.org/10.3389/fsurg.2022.903271 |
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