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Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding

The recently discovered lytic polysaccharide monooxygenases (LPMOs) are Cu-containing enzymes capable of degrading polysaccharide substrates oxidatively. The generally accepted first step in the LPMO reaction is the reduction of the active-site metal ion from Cu(2+) to Cu(+). Here we have used a sys...

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Autores principales: Tandrup, Tobias, Muderspach, Sebastian J., Banerjee, Sanchari, Santoni, Gianluca, Ipsen, Johan Ø., Hernández-Rollán, Cristina, Nørholm, Morten H. H., Johansen, Katja S., Meilleur, Flora, Lo Leggio, Leila
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9438499/
https://www.ncbi.nlm.nih.gov/pubmed/36071795
http://dx.doi.org/10.1107/S2052252522007175
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author Tandrup, Tobias
Muderspach, Sebastian J.
Banerjee, Sanchari
Santoni, Gianluca
Ipsen, Johan Ø.
Hernández-Rollán, Cristina
Nørholm, Morten H. H.
Johansen, Katja S.
Meilleur, Flora
Lo Leggio, Leila
author_facet Tandrup, Tobias
Muderspach, Sebastian J.
Banerjee, Sanchari
Santoni, Gianluca
Ipsen, Johan Ø.
Hernández-Rollán, Cristina
Nørholm, Morten H. H.
Johansen, Katja S.
Meilleur, Flora
Lo Leggio, Leila
author_sort Tandrup, Tobias
collection PubMed
description The recently discovered lytic polysaccharide monooxygenases (LPMOs) are Cu-containing enzymes capable of degrading polysaccharide substrates oxidatively. The generally accepted first step in the LPMO reaction is the reduction of the active-site metal ion from Cu(2+) to Cu(+). Here we have used a systematic diffraction data collection method to monitor structural changes in two AA9 LPMOs, one from Lentinus similis (LsAA9_A) and one from Thermoascus auranti­acus (TaAA9_A), as the active-site Cu is photoreduced in the X-ray beam. For LsAA9_A, the protein produced in two different recombinant systems was crystallized to probe the effect of post-translational modifications and different crystallization conditions on the active site and metal photoreduction. We can recommend that crystallographic studies of AA9 LPMOs wishing to address the Cu(2+) form use a total X-ray dose below 3 × 10(4) Gy, while the Cu(+) form can be attained using 1 × 10(6) Gy. In all cases, we observe the transition from a hexa­coordinated Cu site with two solvent-facing ligands to a T-shaped geometry with no exogenous ligands, and a clear increase of the θ(2) parameter and a decrease of the θ(3) parameter by averages of 9.2° and 8.4°, respectively, but also a slight increase in θ(T). Thus, the θ(2) and θ(3) parameters are helpful diagnostics for the oxidation state of the metal in a His-brace protein. On binding of cello-oligosaccharides to LsAA9_A, regardless of the production source, the θ(T) parameter increases, making the Cu site less planar, while the active-site Tyr—Cu distance decreases reproducibly for the Cu(2+) form. Thus, the θ(T) increase found on copper reduction may bring LsAA9_A closer to an oligosaccharide-bound state and contribute to the observed higher affinity of reduced LsAA9_A for cellulosic substrates.
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spelling pubmed-94384992022-09-06 Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding Tandrup, Tobias Muderspach, Sebastian J. Banerjee, Sanchari Santoni, Gianluca Ipsen, Johan Ø. Hernández-Rollán, Cristina Nørholm, Morten H. H. Johansen, Katja S. Meilleur, Flora Lo Leggio, Leila IUCrJ Research Papers The recently discovered lytic polysaccharide monooxygenases (LPMOs) are Cu-containing enzymes capable of degrading polysaccharide substrates oxidatively. The generally accepted first step in the LPMO reaction is the reduction of the active-site metal ion from Cu(2+) to Cu(+). Here we have used a systematic diffraction data collection method to monitor structural changes in two AA9 LPMOs, one from Lentinus similis (LsAA9_A) and one from Thermoascus auranti­acus (TaAA9_A), as the active-site Cu is photoreduced in the X-ray beam. For LsAA9_A, the protein produced in two different recombinant systems was crystallized to probe the effect of post-translational modifications and different crystallization conditions on the active site and metal photoreduction. We can recommend that crystallographic studies of AA9 LPMOs wishing to address the Cu(2+) form use a total X-ray dose below 3 × 10(4) Gy, while the Cu(+) form can be attained using 1 × 10(6) Gy. In all cases, we observe the transition from a hexa­coordinated Cu site with two solvent-facing ligands to a T-shaped geometry with no exogenous ligands, and a clear increase of the θ(2) parameter and a decrease of the θ(3) parameter by averages of 9.2° and 8.4°, respectively, but also a slight increase in θ(T). Thus, the θ(2) and θ(3) parameters are helpful diagnostics for the oxidation state of the metal in a His-brace protein. On binding of cello-oligosaccharides to LsAA9_A, regardless of the production source, the θ(T) parameter increases, making the Cu site less planar, while the active-site Tyr—Cu distance decreases reproducibly for the Cu(2+) form. Thus, the θ(T) increase found on copper reduction may bring LsAA9_A closer to an oligosaccharide-bound state and contribute to the observed higher affinity of reduced LsAA9_A for cellulosic substrates. International Union of Crystallography 2022-08-17 /pmc/articles/PMC9438499/ /pubmed/36071795 http://dx.doi.org/10.1107/S2052252522007175 Text en © Tobias Tandrup et al. 2022 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Tandrup, Tobias
Muderspach, Sebastian J.
Banerjee, Sanchari
Santoni, Gianluca
Ipsen, Johan Ø.
Hernández-Rollán, Cristina
Nørholm, Morten H. H.
Johansen, Katja S.
Meilleur, Flora
Lo Leggio, Leila
Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding
title Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding
title_full Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding
title_fullStr Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding
title_full_unstemmed Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding
title_short Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding
title_sort changes in active-site geometry on x-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9438499/
https://www.ncbi.nlm.nih.gov/pubmed/36071795
http://dx.doi.org/10.1107/S2052252522007175
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