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LiqBioer: a manually curated database of cancer biomarkers in body fluid
Cancer biomarkers are measurable indicators that play vital roles in clinical applications. Biomarkers in body fluids have gained considerable attention since the development of liquid biopsy, and their data volume is rapidly increasing. Nevertheless, current research lacks the compilation of publis...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9438745/ https://www.ncbi.nlm.nih.gov/pubmed/36053554 http://dx.doi.org/10.1093/database/baac077 |
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author | Geng, Yiding Jin, Lu Tang, Guangjue Zhao, Zhangxiang Gu, Yunyan Yang, Dan |
author_facet | Geng, Yiding Jin, Lu Tang, Guangjue Zhao, Zhangxiang Gu, Yunyan Yang, Dan |
author_sort | Geng, Yiding |
collection | PubMed |
description | Cancer biomarkers are measurable indicators that play vital roles in clinical applications. Biomarkers in body fluids have gained considerable attention since the development of liquid biopsy, and their data volume is rapidly increasing. Nevertheless, current research lacks the compilation of published cancer body fluid biomarkers into a centralized and sustainable repository for researchers and clinicians, despite a handful of small-scale and specific data resources. To fulfill this purpose, we developed liquid biomarker (LiqBioer) containing 6231 manually curated records from 3447 studies, covering 3056 biomarkers and 74 types of cancer in 22 tissues. LiqBioer allows users to browse and download comprehensive information on body liquid biomarkers, including cancer types, source studies and clinical usage. As a comprehensive resource for body fluid biomarkers of cancer, LiqBioer is a powerful tool for researchers and clinicians to query and retrieve biomarkers in liquid biopsy. DATABASE URL: http://www.medsysbio.org:8080/LiqBioer |
format | Online Article Text |
id | pubmed-9438745 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-94387452022-09-06 LiqBioer: a manually curated database of cancer biomarkers in body fluid Geng, Yiding Jin, Lu Tang, Guangjue Zhao, Zhangxiang Gu, Yunyan Yang, Dan Database (Oxford) Original Article Cancer biomarkers are measurable indicators that play vital roles in clinical applications. Biomarkers in body fluids have gained considerable attention since the development of liquid biopsy, and their data volume is rapidly increasing. Nevertheless, current research lacks the compilation of published cancer body fluid biomarkers into a centralized and sustainable repository for researchers and clinicians, despite a handful of small-scale and specific data resources. To fulfill this purpose, we developed liquid biomarker (LiqBioer) containing 6231 manually curated records from 3447 studies, covering 3056 biomarkers and 74 types of cancer in 22 tissues. LiqBioer allows users to browse and download comprehensive information on body liquid biomarkers, including cancer types, source studies and clinical usage. As a comprehensive resource for body fluid biomarkers of cancer, LiqBioer is a powerful tool for researchers and clinicians to query and retrieve biomarkers in liquid biopsy. DATABASE URL: http://www.medsysbio.org:8080/LiqBioer Oxford University Press 2022-09-02 /pmc/articles/PMC9438745/ /pubmed/36053554 http://dx.doi.org/10.1093/database/baac077 Text en © The Author(s) 2022. Published by Oxford University Press. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Original Article Geng, Yiding Jin, Lu Tang, Guangjue Zhao, Zhangxiang Gu, Yunyan Yang, Dan LiqBioer: a manually curated database of cancer biomarkers in body fluid |
title | LiqBioer: a manually curated database of cancer biomarkers in body fluid |
title_full | LiqBioer: a manually curated database of cancer biomarkers in body fluid |
title_fullStr | LiqBioer: a manually curated database of cancer biomarkers in body fluid |
title_full_unstemmed | LiqBioer: a manually curated database of cancer biomarkers in body fluid |
title_short | LiqBioer: a manually curated database of cancer biomarkers in body fluid |
title_sort | liqbioer: a manually curated database of cancer biomarkers in body fluid |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9438745/ https://www.ncbi.nlm.nih.gov/pubmed/36053554 http://dx.doi.org/10.1093/database/baac077 |
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