Cargando…

A universal similarity based approach for predictive uncertainty quantification in materials science

Immense effort has been exerted in the materials informatics community towards enhancing the accuracy of machine learning (ML) models; however, the uncertainty quantification (UQ) of state-of-the-art algorithms also demands further development. Most prominent UQ methods are model-specific or are rel...

Descripción completa

Detalles Bibliográficos
Autores principales: Korolev, Vadim, Nevolin, Iurii, Protsenko, Pavel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9440040/
https://www.ncbi.nlm.nih.gov/pubmed/36056050
http://dx.doi.org/10.1038/s41598-022-19205-5
_version_ 1784782224093085696
author Korolev, Vadim
Nevolin, Iurii
Protsenko, Pavel
author_facet Korolev, Vadim
Nevolin, Iurii
Protsenko, Pavel
author_sort Korolev, Vadim
collection PubMed
description Immense effort has been exerted in the materials informatics community towards enhancing the accuracy of machine learning (ML) models; however, the uncertainty quantification (UQ) of state-of-the-art algorithms also demands further development. Most prominent UQ methods are model-specific or are related to the ensembles of models; therefore, there is a need to develop a universal technique that can be readily applied to a single model from a diverse set of ML algorithms. In this study, we suggest a new UQ measure known as the Δ-metric to address this issue. The presented quantitative criterion was inspired by the k-nearest neighbor approach adopted for applicability domain estimation in chemoinformatics. It surpasses several UQ methods in accurately ranking the predictive errors and could be considered a low-cost option for a more advanced deep ensemble strategy. We also evaluated the performance of the presented UQ measure on various classes of materials, ML algorithms, and types of input features, thus demonstrating its universality.
format Online
Article
Text
id pubmed-9440040
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-94400402022-09-04 A universal similarity based approach for predictive uncertainty quantification in materials science Korolev, Vadim Nevolin, Iurii Protsenko, Pavel Sci Rep Article Immense effort has been exerted in the materials informatics community towards enhancing the accuracy of machine learning (ML) models; however, the uncertainty quantification (UQ) of state-of-the-art algorithms also demands further development. Most prominent UQ methods are model-specific or are related to the ensembles of models; therefore, there is a need to develop a universal technique that can be readily applied to a single model from a diverse set of ML algorithms. In this study, we suggest a new UQ measure known as the Δ-metric to address this issue. The presented quantitative criterion was inspired by the k-nearest neighbor approach adopted for applicability domain estimation in chemoinformatics. It surpasses several UQ methods in accurately ranking the predictive errors and could be considered a low-cost option for a more advanced deep ensemble strategy. We also evaluated the performance of the presented UQ measure on various classes of materials, ML algorithms, and types of input features, thus demonstrating its universality. Nature Publishing Group UK 2022-09-02 /pmc/articles/PMC9440040/ /pubmed/36056050 http://dx.doi.org/10.1038/s41598-022-19205-5 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Korolev, Vadim
Nevolin, Iurii
Protsenko, Pavel
A universal similarity based approach for predictive uncertainty quantification in materials science
title A universal similarity based approach for predictive uncertainty quantification in materials science
title_full A universal similarity based approach for predictive uncertainty quantification in materials science
title_fullStr A universal similarity based approach for predictive uncertainty quantification in materials science
title_full_unstemmed A universal similarity based approach for predictive uncertainty quantification in materials science
title_short A universal similarity based approach for predictive uncertainty quantification in materials science
title_sort universal similarity based approach for predictive uncertainty quantification in materials science
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9440040/
https://www.ncbi.nlm.nih.gov/pubmed/36056050
http://dx.doi.org/10.1038/s41598-022-19205-5
work_keys_str_mv AT korolevvadim auniversalsimilaritybasedapproachforpredictiveuncertaintyquantificationinmaterialsscience
AT nevoliniurii auniversalsimilaritybasedapproachforpredictiveuncertaintyquantificationinmaterialsscience
AT protsenkopavel auniversalsimilaritybasedapproachforpredictiveuncertaintyquantificationinmaterialsscience
AT korolevvadim universalsimilaritybasedapproachforpredictiveuncertaintyquantificationinmaterialsscience
AT nevoliniurii universalsimilaritybasedapproachforpredictiveuncertaintyquantificationinmaterialsscience
AT protsenkopavel universalsimilaritybasedapproachforpredictiveuncertaintyquantificationinmaterialsscience