Cargando…
A visualization reporter system for characterizing antibiotic biosynthetic gene clusters expression with high-sensitivity
The crisis of antibiotic resistance has become an impending global problem. Genome sequencing reveals that streptomycetes have the potential to produce many more bioactive compounds that may combat the emerging pathogens. The existing challenge is to devise sensitive reporter systems for mining valu...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9440138/ https://www.ncbi.nlm.nih.gov/pubmed/36056143 http://dx.doi.org/10.1038/s42003-022-03832-9 |
_version_ | 1784782270622597120 |
---|---|
author | Liu, Xiang Li, Jine Li, Yue Li, Junyue Sun, Huiying Zheng, Jiazhen Zhang, Jihui Tan, Huarong |
author_facet | Liu, Xiang Li, Jine Li, Yue Li, Junyue Sun, Huiying Zheng, Jiazhen Zhang, Jihui Tan, Huarong |
author_sort | Liu, Xiang |
collection | PubMed |
description | The crisis of antibiotic resistance has become an impending global problem. Genome sequencing reveals that streptomycetes have the potential to produce many more bioactive compounds that may combat the emerging pathogens. The existing challenge is to devise sensitive reporter systems for mining valuable antibiotics. Here, we report a visualization reporter system based on Gram-negative bacterial acyl-homoserine lactone quorum-sensing (VRS-bAHL). AHL synthase gene (cviI) of Chromobacterium violaceum as reporter gene is expressed in Gram-positive Streptomyces to synthesize AHL, which is detected with CV026, an AHL deficient mutant of C. violaceum, via its violacein production upon AHL induction. Validation assays prove that VRS-bAHL can be widely used for characterizing gene expression in Streptomyces. With the guidance of VRS-bAHL, a novel oxazolomycin derivative is discovered to the best of our knowledge. The results demonstrate that VRS-bAHL is a powerful tool for advancing genetic regulation studies and discovering valuable active metabolites in microorganisms. |
format | Online Article Text |
id | pubmed-9440138 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-94401382022-09-04 A visualization reporter system for characterizing antibiotic biosynthetic gene clusters expression with high-sensitivity Liu, Xiang Li, Jine Li, Yue Li, Junyue Sun, Huiying Zheng, Jiazhen Zhang, Jihui Tan, Huarong Commun Biol Article The crisis of antibiotic resistance has become an impending global problem. Genome sequencing reveals that streptomycetes have the potential to produce many more bioactive compounds that may combat the emerging pathogens. The existing challenge is to devise sensitive reporter systems for mining valuable antibiotics. Here, we report a visualization reporter system based on Gram-negative bacterial acyl-homoserine lactone quorum-sensing (VRS-bAHL). AHL synthase gene (cviI) of Chromobacterium violaceum as reporter gene is expressed in Gram-positive Streptomyces to synthesize AHL, which is detected with CV026, an AHL deficient mutant of C. violaceum, via its violacein production upon AHL induction. Validation assays prove that VRS-bAHL can be widely used for characterizing gene expression in Streptomyces. With the guidance of VRS-bAHL, a novel oxazolomycin derivative is discovered to the best of our knowledge. The results demonstrate that VRS-bAHL is a powerful tool for advancing genetic regulation studies and discovering valuable active metabolites in microorganisms. Nature Publishing Group UK 2022-09-02 /pmc/articles/PMC9440138/ /pubmed/36056143 http://dx.doi.org/10.1038/s42003-022-03832-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Liu, Xiang Li, Jine Li, Yue Li, Junyue Sun, Huiying Zheng, Jiazhen Zhang, Jihui Tan, Huarong A visualization reporter system for characterizing antibiotic biosynthetic gene clusters expression with high-sensitivity |
title | A visualization reporter system for characterizing antibiotic biosynthetic gene clusters expression with high-sensitivity |
title_full | A visualization reporter system for characterizing antibiotic biosynthetic gene clusters expression with high-sensitivity |
title_fullStr | A visualization reporter system for characterizing antibiotic biosynthetic gene clusters expression with high-sensitivity |
title_full_unstemmed | A visualization reporter system for characterizing antibiotic biosynthetic gene clusters expression with high-sensitivity |
title_short | A visualization reporter system for characterizing antibiotic biosynthetic gene clusters expression with high-sensitivity |
title_sort | visualization reporter system for characterizing antibiotic biosynthetic gene clusters expression with high-sensitivity |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9440138/ https://www.ncbi.nlm.nih.gov/pubmed/36056143 http://dx.doi.org/10.1038/s42003-022-03832-9 |
work_keys_str_mv | AT liuxiang avisualizationreportersystemforcharacterizingantibioticbiosyntheticgeneclustersexpressionwithhighsensitivity AT lijine avisualizationreportersystemforcharacterizingantibioticbiosyntheticgeneclustersexpressionwithhighsensitivity AT liyue avisualizationreportersystemforcharacterizingantibioticbiosyntheticgeneclustersexpressionwithhighsensitivity AT lijunyue avisualizationreportersystemforcharacterizingantibioticbiosyntheticgeneclustersexpressionwithhighsensitivity AT sunhuiying avisualizationreportersystemforcharacterizingantibioticbiosyntheticgeneclustersexpressionwithhighsensitivity AT zhengjiazhen avisualizationreportersystemforcharacterizingantibioticbiosyntheticgeneclustersexpressionwithhighsensitivity AT zhangjihui avisualizationreportersystemforcharacterizingantibioticbiosyntheticgeneclustersexpressionwithhighsensitivity AT tanhuarong avisualizationreportersystemforcharacterizingantibioticbiosyntheticgeneclustersexpressionwithhighsensitivity AT liuxiang visualizationreportersystemforcharacterizingantibioticbiosyntheticgeneclustersexpressionwithhighsensitivity AT lijine visualizationreportersystemforcharacterizingantibioticbiosyntheticgeneclustersexpressionwithhighsensitivity AT liyue visualizationreportersystemforcharacterizingantibioticbiosyntheticgeneclustersexpressionwithhighsensitivity AT lijunyue visualizationreportersystemforcharacterizingantibioticbiosyntheticgeneclustersexpressionwithhighsensitivity AT sunhuiying visualizationreportersystemforcharacterizingantibioticbiosyntheticgeneclustersexpressionwithhighsensitivity AT zhengjiazhen visualizationreportersystemforcharacterizingantibioticbiosyntheticgeneclustersexpressionwithhighsensitivity AT zhangjihui visualizationreportersystemforcharacterizingantibioticbiosyntheticgeneclustersexpressionwithhighsensitivity AT tanhuarong visualizationreportersystemforcharacterizingantibioticbiosyntheticgeneclustersexpressionwithhighsensitivity |