Cargando…

A Novel Metabolism-Related Gene Signature for Predicting the Prognosis of HBV-Infected Hepatocellular Carcinoma

Metabolic reprogramming is one of the crucial hallmarks of cancer. Hepatocellular carcinoma (HCC) resulting from hepatitis B has various altered metabolic features. However, the impact of such alterations on the tumor microenvironment (TME) and immunotherapy efficacy is still unclear. Here, a progno...

Descripción completa

Detalles Bibliográficos
Autores principales: Gao, Zhenfu, Chen, Jingyun, Zhou, Yebin, Deng, Pan, Sun, Lu, Qi, Jun, Zhang, Ping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9441393/
https://www.ncbi.nlm.nih.gov/pubmed/36072970
http://dx.doi.org/10.1155/2022/2391265
_version_ 1784782563528671232
author Gao, Zhenfu
Chen, Jingyun
Zhou, Yebin
Deng, Pan
Sun, Lu
Qi, Jun
Zhang, Ping
author_facet Gao, Zhenfu
Chen, Jingyun
Zhou, Yebin
Deng, Pan
Sun, Lu
Qi, Jun
Zhang, Ping
author_sort Gao, Zhenfu
collection PubMed
description Metabolic reprogramming is one of the crucial hallmarks of cancer. Hepatocellular carcinoma (HCC) resulting from hepatitis B has various altered metabolic features. However, the impact of such alterations on the tumor microenvironment (TME) and immunotherapy efficacy is still unclear. Here, a prognostic signature of metabolism-related gene (MRG) composition was constructed, and the immune profile of different subgroups and potential response to immunotherapy were described. Based on the HCC gene dataset, we used weighted gene coexpression network analysis for identifying MRGs linked to hepatitis B. An MRG prognostic index (MRGPI) with two genes, ATIC and KIF2C, was constructed using Cox regression analysis, an independent prognostic factor. In addition, the model was validated using the GEO dataset. The immune profile and prediction of HCC response to immunotherapy in different subgroups were analyzed using CIBERSORT and TIDE. Based on the outcomes, the distributions of memory B cells, monocytes, resting mast cells, and M0 macrophages in TME were different with a greater benefit of immunotherapy in the low MRGPI risk group. In addition, the MRGPI risk groups showed substantial differences in sensitivity to conventional drug therapy. This study concludes that MRGPI is an effective biomarker for predicting the prognoses of patients with HCC resulting from hepatitis B virus infections and determining the efficacy of immunotherapy and conventional medical therapy.
format Online
Article
Text
id pubmed-9441393
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Hindawi
record_format MEDLINE/PubMed
spelling pubmed-94413932022-09-06 A Novel Metabolism-Related Gene Signature for Predicting the Prognosis of HBV-Infected Hepatocellular Carcinoma Gao, Zhenfu Chen, Jingyun Zhou, Yebin Deng, Pan Sun, Lu Qi, Jun Zhang, Ping J Oncol Research Article Metabolic reprogramming is one of the crucial hallmarks of cancer. Hepatocellular carcinoma (HCC) resulting from hepatitis B has various altered metabolic features. However, the impact of such alterations on the tumor microenvironment (TME) and immunotherapy efficacy is still unclear. Here, a prognostic signature of metabolism-related gene (MRG) composition was constructed, and the immune profile of different subgroups and potential response to immunotherapy were described. Based on the HCC gene dataset, we used weighted gene coexpression network analysis for identifying MRGs linked to hepatitis B. An MRG prognostic index (MRGPI) with two genes, ATIC and KIF2C, was constructed using Cox regression analysis, an independent prognostic factor. In addition, the model was validated using the GEO dataset. The immune profile and prediction of HCC response to immunotherapy in different subgroups were analyzed using CIBERSORT and TIDE. Based on the outcomes, the distributions of memory B cells, monocytes, resting mast cells, and M0 macrophages in TME were different with a greater benefit of immunotherapy in the low MRGPI risk group. In addition, the MRGPI risk groups showed substantial differences in sensitivity to conventional drug therapy. This study concludes that MRGPI is an effective biomarker for predicting the prognoses of patients with HCC resulting from hepatitis B virus infections and determining the efficacy of immunotherapy and conventional medical therapy. Hindawi 2022-08-28 /pmc/articles/PMC9441393/ /pubmed/36072970 http://dx.doi.org/10.1155/2022/2391265 Text en Copyright © 2022 Zhenfu Gao et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Gao, Zhenfu
Chen, Jingyun
Zhou, Yebin
Deng, Pan
Sun, Lu
Qi, Jun
Zhang, Ping
A Novel Metabolism-Related Gene Signature for Predicting the Prognosis of HBV-Infected Hepatocellular Carcinoma
title A Novel Metabolism-Related Gene Signature for Predicting the Prognosis of HBV-Infected Hepatocellular Carcinoma
title_full A Novel Metabolism-Related Gene Signature for Predicting the Prognosis of HBV-Infected Hepatocellular Carcinoma
title_fullStr A Novel Metabolism-Related Gene Signature for Predicting the Prognosis of HBV-Infected Hepatocellular Carcinoma
title_full_unstemmed A Novel Metabolism-Related Gene Signature for Predicting the Prognosis of HBV-Infected Hepatocellular Carcinoma
title_short A Novel Metabolism-Related Gene Signature for Predicting the Prognosis of HBV-Infected Hepatocellular Carcinoma
title_sort novel metabolism-related gene signature for predicting the prognosis of hbv-infected hepatocellular carcinoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9441393/
https://www.ncbi.nlm.nih.gov/pubmed/36072970
http://dx.doi.org/10.1155/2022/2391265
work_keys_str_mv AT gaozhenfu anovelmetabolismrelatedgenesignatureforpredictingtheprognosisofhbvinfectedhepatocellularcarcinoma
AT chenjingyun anovelmetabolismrelatedgenesignatureforpredictingtheprognosisofhbvinfectedhepatocellularcarcinoma
AT zhouyebin anovelmetabolismrelatedgenesignatureforpredictingtheprognosisofhbvinfectedhepatocellularcarcinoma
AT dengpan anovelmetabolismrelatedgenesignatureforpredictingtheprognosisofhbvinfectedhepatocellularcarcinoma
AT sunlu anovelmetabolismrelatedgenesignatureforpredictingtheprognosisofhbvinfectedhepatocellularcarcinoma
AT qijun anovelmetabolismrelatedgenesignatureforpredictingtheprognosisofhbvinfectedhepatocellularcarcinoma
AT zhangping anovelmetabolismrelatedgenesignatureforpredictingtheprognosisofhbvinfectedhepatocellularcarcinoma
AT gaozhenfu novelmetabolismrelatedgenesignatureforpredictingtheprognosisofhbvinfectedhepatocellularcarcinoma
AT chenjingyun novelmetabolismrelatedgenesignatureforpredictingtheprognosisofhbvinfectedhepatocellularcarcinoma
AT zhouyebin novelmetabolismrelatedgenesignatureforpredictingtheprognosisofhbvinfectedhepatocellularcarcinoma
AT dengpan novelmetabolismrelatedgenesignatureforpredictingtheprognosisofhbvinfectedhepatocellularcarcinoma
AT sunlu novelmetabolismrelatedgenesignatureforpredictingtheprognosisofhbvinfectedhepatocellularcarcinoma
AT qijun novelmetabolismrelatedgenesignatureforpredictingtheprognosisofhbvinfectedhepatocellularcarcinoma
AT zhangping novelmetabolismrelatedgenesignatureforpredictingtheprognosisofhbvinfectedhepatocellularcarcinoma