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Predicting AURKA as a novel therapeutic target for NPC: A comprehensive analysis based on bioinformatics and validation

This study comprehensively explored the clinical function of Aurora kinase A (AURKA) gene in nasopharyngeal carcinoma (NPC) and analyzed its potential as a therapeutic target in cancer. Data were downloaded from GEO, STRING, GTEx, and CellMiner databases, and subjected to multiple bioinformatic anal...

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Autores principales: Huang, Chaobin, Chen, Lin, Zhang, Yiping, Wang, Liyan, Zheng, Wei, Peng, Fengying, Xu, Yuanji
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9441489/
https://www.ncbi.nlm.nih.gov/pubmed/36072667
http://dx.doi.org/10.3389/fgene.2022.926546
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author Huang, Chaobin
Chen, Lin
Zhang, Yiping
Wang, Liyan
Zheng, Wei
Peng, Fengying
Xu, Yuanji
author_facet Huang, Chaobin
Chen, Lin
Zhang, Yiping
Wang, Liyan
Zheng, Wei
Peng, Fengying
Xu, Yuanji
author_sort Huang, Chaobin
collection PubMed
description This study comprehensively explored the clinical function of Aurora kinase A (AURKA) gene in nasopharyngeal carcinoma (NPC) and analyzed its potential as a therapeutic target in cancer. Data were downloaded from GEO, STRING, GTEx, and CellMiner databases, and subjected to multiple bioinformatic analyses, including differential expression analysis, WCGNA, gene ontology (GO), Kyoto encyclopedia of genes and genomes (KEGG), gene set enrichment analysis (GSEA), gene set variation analysis (GSVA), miRNA-hub gene regulatory network analysis, immune cell infiltration, and drug sensitivity analysis. In-depth analysis of AURKA gene expression in NPC and its corresponding clinicopathological features was performed to explore its potential as a therapeutic target. Moreover, AURKA gene expression in NPC was validated by qRT-PCR in 21 NPC tissues and 17 normal nasopharyngeal epithelial tissues. AURKA was highly expressed in NPC tissues. Enrichment analysis of AURKA and its co-expressed hub genes indicated their oncogenic role in NPC and their potential involvement in cancer-promoting processes through histone kinase activity and microtubule motility activity, cell cycle, and p53 signaling pathways. AURKA high expression group had greater infiltration of neutrophils, macrophages M2, and dendritic cells resting and less infiltration of T cells CD4(+) naïve and T cells γδ. Drug susceptibility analysis found that dacarbazine, R-306465, vorinostat, and other antitumor drugs that act on the cell cycle were closely related to AURKA. qRT-PCR verified the high expression of AURKA in NPC tissues (p < 0.05). We confirmed upregulation of AURKA in NPC tissues. Our results support an oncogenic role of AURKA in the context of NPC, and indicate its potential role as a novel therapeutic target.
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spelling pubmed-94414892022-09-06 Predicting AURKA as a novel therapeutic target for NPC: A comprehensive analysis based on bioinformatics and validation Huang, Chaobin Chen, Lin Zhang, Yiping Wang, Liyan Zheng, Wei Peng, Fengying Xu, Yuanji Front Genet Genetics This study comprehensively explored the clinical function of Aurora kinase A (AURKA) gene in nasopharyngeal carcinoma (NPC) and analyzed its potential as a therapeutic target in cancer. Data were downloaded from GEO, STRING, GTEx, and CellMiner databases, and subjected to multiple bioinformatic analyses, including differential expression analysis, WCGNA, gene ontology (GO), Kyoto encyclopedia of genes and genomes (KEGG), gene set enrichment analysis (GSEA), gene set variation analysis (GSVA), miRNA-hub gene regulatory network analysis, immune cell infiltration, and drug sensitivity analysis. In-depth analysis of AURKA gene expression in NPC and its corresponding clinicopathological features was performed to explore its potential as a therapeutic target. Moreover, AURKA gene expression in NPC was validated by qRT-PCR in 21 NPC tissues and 17 normal nasopharyngeal epithelial tissues. AURKA was highly expressed in NPC tissues. Enrichment analysis of AURKA and its co-expressed hub genes indicated their oncogenic role in NPC and their potential involvement in cancer-promoting processes through histone kinase activity and microtubule motility activity, cell cycle, and p53 signaling pathways. AURKA high expression group had greater infiltration of neutrophils, macrophages M2, and dendritic cells resting and less infiltration of T cells CD4(+) naïve and T cells γδ. Drug susceptibility analysis found that dacarbazine, R-306465, vorinostat, and other antitumor drugs that act on the cell cycle were closely related to AURKA. qRT-PCR verified the high expression of AURKA in NPC tissues (p < 0.05). We confirmed upregulation of AURKA in NPC tissues. Our results support an oncogenic role of AURKA in the context of NPC, and indicate its potential role as a novel therapeutic target. Frontiers Media S.A. 2022-08-22 /pmc/articles/PMC9441489/ /pubmed/36072667 http://dx.doi.org/10.3389/fgene.2022.926546 Text en Copyright © 2022 Huang, Chen, Zhang, Wang, Zheng, Peng and Xu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Huang, Chaobin
Chen, Lin
Zhang, Yiping
Wang, Liyan
Zheng, Wei
Peng, Fengying
Xu, Yuanji
Predicting AURKA as a novel therapeutic target for NPC: A comprehensive analysis based on bioinformatics and validation
title Predicting AURKA as a novel therapeutic target for NPC: A comprehensive analysis based on bioinformatics and validation
title_full Predicting AURKA as a novel therapeutic target for NPC: A comprehensive analysis based on bioinformatics and validation
title_fullStr Predicting AURKA as a novel therapeutic target for NPC: A comprehensive analysis based on bioinformatics and validation
title_full_unstemmed Predicting AURKA as a novel therapeutic target for NPC: A comprehensive analysis based on bioinformatics and validation
title_short Predicting AURKA as a novel therapeutic target for NPC: A comprehensive analysis based on bioinformatics and validation
title_sort predicting aurka as a novel therapeutic target for npc: a comprehensive analysis based on bioinformatics and validation
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9441489/
https://www.ncbi.nlm.nih.gov/pubmed/36072667
http://dx.doi.org/10.3389/fgene.2022.926546
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