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Toward data lakes as central building blocks for data management and analysis
Data lakes are a fundamental building block for many industrial data analysis solutions and becoming increasingly popular in research. Often associated with big data use cases, data lakes are, for example, used as central data management systems of research institutions or as the core entity of mach...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9442782/ https://www.ncbi.nlm.nih.gov/pubmed/36072823 http://dx.doi.org/10.3389/fdata.2022.945720 |
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author | Wieder, Philipp Nolte, Hendrik |
author_facet | Wieder, Philipp Nolte, Hendrik |
author_sort | Wieder, Philipp |
collection | PubMed |
description | Data lakes are a fundamental building block for many industrial data analysis solutions and becoming increasingly popular in research. Often associated with big data use cases, data lakes are, for example, used as central data management systems of research institutions or as the core entity of machine learning pipelines. The basic underlying idea of retaining data in its native format within a data lake facilitates a large range of use cases and improves data reusability, especially when compared to the schema-on-write approach applied in data warehouses, where data is transformed prior to the actual storage to fit a predefined schema. Storing such massive amounts of raw data, however, has its very own challenges, spanning from the general data modeling, and indexing for concise querying to the integration of suitable and scalable compute capabilities. In this contribution, influential papers of the last decade have been selected to provide a comprehensive overview of developments and obtained results. The papers are analyzed with regard to the applicability of their input to data lakes that serve as central data management systems of research institutions. To achieve this, contributions to data lake architectures, metadata models, data provenance, workflow support, and FAIR principles are investigated. Last, but not least, these capabilities are mapped onto the requirements of two common research personae to identify open challenges. With that, potential research topics are determined, which have to be tackled toward the applicability of data lakes as central building blocks for research data management. |
format | Online Article Text |
id | pubmed-9442782 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-94427822022-09-06 Toward data lakes as central building blocks for data management and analysis Wieder, Philipp Nolte, Hendrik Front Big Data Big Data Data lakes are a fundamental building block for many industrial data analysis solutions and becoming increasingly popular in research. Often associated with big data use cases, data lakes are, for example, used as central data management systems of research institutions or as the core entity of machine learning pipelines. The basic underlying idea of retaining data in its native format within a data lake facilitates a large range of use cases and improves data reusability, especially when compared to the schema-on-write approach applied in data warehouses, where data is transformed prior to the actual storage to fit a predefined schema. Storing such massive amounts of raw data, however, has its very own challenges, spanning from the general data modeling, and indexing for concise querying to the integration of suitable and scalable compute capabilities. In this contribution, influential papers of the last decade have been selected to provide a comprehensive overview of developments and obtained results. The papers are analyzed with regard to the applicability of their input to data lakes that serve as central data management systems of research institutions. To achieve this, contributions to data lake architectures, metadata models, data provenance, workflow support, and FAIR principles are investigated. Last, but not least, these capabilities are mapped onto the requirements of two common research personae to identify open challenges. With that, potential research topics are determined, which have to be tackled toward the applicability of data lakes as central building blocks for research data management. Frontiers Media S.A. 2022-08-19 /pmc/articles/PMC9442782/ /pubmed/36072823 http://dx.doi.org/10.3389/fdata.2022.945720 Text en Copyright © 2022 Wieder and Nolte. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Big Data Wieder, Philipp Nolte, Hendrik Toward data lakes as central building blocks for data management and analysis |
title | Toward data lakes as central building blocks for data management and analysis |
title_full | Toward data lakes as central building blocks for data management and analysis |
title_fullStr | Toward data lakes as central building blocks for data management and analysis |
title_full_unstemmed | Toward data lakes as central building blocks for data management and analysis |
title_short | Toward data lakes as central building blocks for data management and analysis |
title_sort | toward data lakes as central building blocks for data management and analysis |
topic | Big Data |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9442782/ https://www.ncbi.nlm.nih.gov/pubmed/36072823 http://dx.doi.org/10.3389/fdata.2022.945720 |
work_keys_str_mv | AT wiederphilipp towarddatalakesascentralbuildingblocksfordatamanagementandanalysis AT noltehendrik towarddatalakesascentralbuildingblocksfordatamanagementandanalysis |