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Identification of a Signature for Predicting Prognosis and Immunotherapy Response in Patients with Glioma
Glioma is a deadly tumor that accounts for the vast majority of brain tumors. Thus, it is important to elucidate the molecular pathogenesis and potential diagnostic and prognostic biomarkers of glioma. In the present study, gene expression profiles of GSE2223 were obtained from the Gene Expression O...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9444386/ https://www.ncbi.nlm.nih.gov/pubmed/36072978 http://dx.doi.org/10.1155/2022/8615949 |
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author | Zong, Wei-Feng Liu, Cui Zhang, Yi Zhang, Suo-Jun Qu, Wen-Sheng Luo, Xiang |
author_facet | Zong, Wei-Feng Liu, Cui Zhang, Yi Zhang, Suo-Jun Qu, Wen-Sheng Luo, Xiang |
author_sort | Zong, Wei-Feng |
collection | PubMed |
description | Glioma is a deadly tumor that accounts for the vast majority of brain tumors. Thus, it is important to elucidate the molecular pathogenesis and potential diagnostic and prognostic biomarkers of glioma. In the present study, gene expression profiles of GSE2223 were obtained from the Gene Expression Omnibus (GEO) database. Core modules and hub genes related to glioma were identified using weighted gene coexpression network analysis (WGCNA) and protein-protein interaction (PPI) network analysis of differentially expressed genes (DEGs). After a series of database screening tests, we identified 11 modules during glioma progression, followed by six hub genes (RAB3A, TYROBP, SYP, CAMK2A, VSIG4, and GABRA1) that can predict the prognosis of glioma and were validated in glioma tissues by qRT-PCR. The CIBERSORT algorithm was used to analyze the difference of immune cell infiltration between the glioma and control groups. Finally, Identification VSIG4 for immunotherapy response in patients with glioma demonstrating utility for immunotherapy research. |
format | Online Article Text |
id | pubmed-9444386 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-94443862022-09-06 Identification of a Signature for Predicting Prognosis and Immunotherapy Response in Patients with Glioma Zong, Wei-Feng Liu, Cui Zhang, Yi Zhang, Suo-Jun Qu, Wen-Sheng Luo, Xiang J Oncol Research Article Glioma is a deadly tumor that accounts for the vast majority of brain tumors. Thus, it is important to elucidate the molecular pathogenesis and potential diagnostic and prognostic biomarkers of glioma. In the present study, gene expression profiles of GSE2223 were obtained from the Gene Expression Omnibus (GEO) database. Core modules and hub genes related to glioma were identified using weighted gene coexpression network analysis (WGCNA) and protein-protein interaction (PPI) network analysis of differentially expressed genes (DEGs). After a series of database screening tests, we identified 11 modules during glioma progression, followed by six hub genes (RAB3A, TYROBP, SYP, CAMK2A, VSIG4, and GABRA1) that can predict the prognosis of glioma and were validated in glioma tissues by qRT-PCR. The CIBERSORT algorithm was used to analyze the difference of immune cell infiltration between the glioma and control groups. Finally, Identification VSIG4 for immunotherapy response in patients with glioma demonstrating utility for immunotherapy research. Hindawi 2022-08-29 /pmc/articles/PMC9444386/ /pubmed/36072978 http://dx.doi.org/10.1155/2022/8615949 Text en Copyright © 2022 Wei-Feng Zong et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Zong, Wei-Feng Liu, Cui Zhang, Yi Zhang, Suo-Jun Qu, Wen-Sheng Luo, Xiang Identification of a Signature for Predicting Prognosis and Immunotherapy Response in Patients with Glioma |
title | Identification of a Signature for Predicting Prognosis and Immunotherapy Response in Patients with Glioma |
title_full | Identification of a Signature for Predicting Prognosis and Immunotherapy Response in Patients with Glioma |
title_fullStr | Identification of a Signature for Predicting Prognosis and Immunotherapy Response in Patients with Glioma |
title_full_unstemmed | Identification of a Signature for Predicting Prognosis and Immunotherapy Response in Patients with Glioma |
title_short | Identification of a Signature for Predicting Prognosis and Immunotherapy Response in Patients with Glioma |
title_sort | identification of a signature for predicting prognosis and immunotherapy response in patients with glioma |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9444386/ https://www.ncbi.nlm.nih.gov/pubmed/36072978 http://dx.doi.org/10.1155/2022/8615949 |
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