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Identification of a Signature for Predicting Prognosis and Immunotherapy Response in Patients with Glioma

Glioma is a deadly tumor that accounts for the vast majority of brain tumors. Thus, it is important to elucidate the molecular pathogenesis and potential diagnostic and prognostic biomarkers of glioma. In the present study, gene expression profiles of GSE2223 were obtained from the Gene Expression O...

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Autores principales: Zong, Wei-Feng, Liu, Cui, Zhang, Yi, Zhang, Suo-Jun, Qu, Wen-Sheng, Luo, Xiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9444386/
https://www.ncbi.nlm.nih.gov/pubmed/36072978
http://dx.doi.org/10.1155/2022/8615949
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author Zong, Wei-Feng
Liu, Cui
Zhang, Yi
Zhang, Suo-Jun
Qu, Wen-Sheng
Luo, Xiang
author_facet Zong, Wei-Feng
Liu, Cui
Zhang, Yi
Zhang, Suo-Jun
Qu, Wen-Sheng
Luo, Xiang
author_sort Zong, Wei-Feng
collection PubMed
description Glioma is a deadly tumor that accounts for the vast majority of brain tumors. Thus, it is important to elucidate the molecular pathogenesis and potential diagnostic and prognostic biomarkers of glioma. In the present study, gene expression profiles of GSE2223 were obtained from the Gene Expression Omnibus (GEO) database. Core modules and hub genes related to glioma were identified using weighted gene coexpression network analysis (WGCNA) and protein-protein interaction (PPI) network analysis of differentially expressed genes (DEGs). After a series of database screening tests, we identified 11 modules during glioma progression, followed by six hub genes (RAB3A, TYROBP, SYP, CAMK2A, VSIG4, and GABRA1) that can predict the prognosis of glioma and were validated in glioma tissues by qRT-PCR. The CIBERSORT algorithm was used to analyze the difference of immune cell infiltration between the glioma and control groups. Finally, Identification VSIG4 for immunotherapy response in patients with glioma demonstrating utility for immunotherapy research.
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spelling pubmed-94443862022-09-06 Identification of a Signature for Predicting Prognosis and Immunotherapy Response in Patients with Glioma Zong, Wei-Feng Liu, Cui Zhang, Yi Zhang, Suo-Jun Qu, Wen-Sheng Luo, Xiang J Oncol Research Article Glioma is a deadly tumor that accounts for the vast majority of brain tumors. Thus, it is important to elucidate the molecular pathogenesis and potential diagnostic and prognostic biomarkers of glioma. In the present study, gene expression profiles of GSE2223 were obtained from the Gene Expression Omnibus (GEO) database. Core modules and hub genes related to glioma were identified using weighted gene coexpression network analysis (WGCNA) and protein-protein interaction (PPI) network analysis of differentially expressed genes (DEGs). After a series of database screening tests, we identified 11 modules during glioma progression, followed by six hub genes (RAB3A, TYROBP, SYP, CAMK2A, VSIG4, and GABRA1) that can predict the prognosis of glioma and were validated in glioma tissues by qRT-PCR. The CIBERSORT algorithm was used to analyze the difference of immune cell infiltration between the glioma and control groups. Finally, Identification VSIG4 for immunotherapy response in patients with glioma demonstrating utility for immunotherapy research. Hindawi 2022-08-29 /pmc/articles/PMC9444386/ /pubmed/36072978 http://dx.doi.org/10.1155/2022/8615949 Text en Copyright © 2022 Wei-Feng Zong et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Zong, Wei-Feng
Liu, Cui
Zhang, Yi
Zhang, Suo-Jun
Qu, Wen-Sheng
Luo, Xiang
Identification of a Signature for Predicting Prognosis and Immunotherapy Response in Patients with Glioma
title Identification of a Signature for Predicting Prognosis and Immunotherapy Response in Patients with Glioma
title_full Identification of a Signature for Predicting Prognosis and Immunotherapy Response in Patients with Glioma
title_fullStr Identification of a Signature for Predicting Prognosis and Immunotherapy Response in Patients with Glioma
title_full_unstemmed Identification of a Signature for Predicting Prognosis and Immunotherapy Response in Patients with Glioma
title_short Identification of a Signature for Predicting Prognosis and Immunotherapy Response in Patients with Glioma
title_sort identification of a signature for predicting prognosis and immunotherapy response in patients with glioma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9444386/
https://www.ncbi.nlm.nih.gov/pubmed/36072978
http://dx.doi.org/10.1155/2022/8615949
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