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A Comprehensive Survey with Quantitative Comparison of Image Analysis Methods for Microorganism Biovolume Measurements

With the acceleration of urbanization and living standards, microorganisms play an increasingly important role in industrial production, bio-technique, and food safety testing. Microorganism biovolume measurements are one of the essential parts of microbial analysis. However, traditional manual meas...

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Autores principales: Zhang, Jiawei, Li, Chen, Rahaman, Md Mamunur, Yao, Yudong, Ma, Pingli, Zhang, Jinghua, Zhao, Xin, Jiang, Tao, Grzegorzek, Marcin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Netherlands 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9446599/
https://www.ncbi.nlm.nih.gov/pubmed/36091717
http://dx.doi.org/10.1007/s11831-022-09811-x
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author Zhang, Jiawei
Li, Chen
Rahaman, Md Mamunur
Yao, Yudong
Ma, Pingli
Zhang, Jinghua
Zhao, Xin
Jiang, Tao
Grzegorzek, Marcin
author_facet Zhang, Jiawei
Li, Chen
Rahaman, Md Mamunur
Yao, Yudong
Ma, Pingli
Zhang, Jinghua
Zhao, Xin
Jiang, Tao
Grzegorzek, Marcin
author_sort Zhang, Jiawei
collection PubMed
description With the acceleration of urbanization and living standards, microorganisms play an increasingly important role in industrial production, bio-technique, and food safety testing. Microorganism biovolume measurements are one of the essential parts of microbial analysis. However, traditional manual measurement methods are time-consuming and challenging to measure the characteristics precisely. With the development of digital image processing techniques, the characteristics of the microbial population can be detected and quantified. The applications of the microorganism biovolume measurement method have developed since the 1980s. More than 62 articles are reviewed in this study, and the articles are grouped by digital image analysis methods with time. This study has high research significance and application value, which can be referred to as microbial researchers to comprehensively understand microorganism biovolume measurements using digital image analysis methods and potential applications.
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spelling pubmed-94465992022-09-06 A Comprehensive Survey with Quantitative Comparison of Image Analysis Methods for Microorganism Biovolume Measurements Zhang, Jiawei Li, Chen Rahaman, Md Mamunur Yao, Yudong Ma, Pingli Zhang, Jinghua Zhao, Xin Jiang, Tao Grzegorzek, Marcin Arch Comput Methods Eng Survey Article With the acceleration of urbanization and living standards, microorganisms play an increasingly important role in industrial production, bio-technique, and food safety testing. Microorganism biovolume measurements are one of the essential parts of microbial analysis. However, traditional manual measurement methods are time-consuming and challenging to measure the characteristics precisely. With the development of digital image processing techniques, the characteristics of the microbial population can be detected and quantified. The applications of the microorganism biovolume measurement method have developed since the 1980s. More than 62 articles are reviewed in this study, and the articles are grouped by digital image analysis methods with time. This study has high research significance and application value, which can be referred to as microbial researchers to comprehensively understand microorganism biovolume measurements using digital image analysis methods and potential applications. Springer Netherlands 2022-09-06 2023 /pmc/articles/PMC9446599/ /pubmed/36091717 http://dx.doi.org/10.1007/s11831-022-09811-x Text en © The Author(s) under exclusive licence to International Center for Numerical Methods in Engineering (CIMNE) 2022, Springer Nature or its licensor holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Survey Article
Zhang, Jiawei
Li, Chen
Rahaman, Md Mamunur
Yao, Yudong
Ma, Pingli
Zhang, Jinghua
Zhao, Xin
Jiang, Tao
Grzegorzek, Marcin
A Comprehensive Survey with Quantitative Comparison of Image Analysis Methods for Microorganism Biovolume Measurements
title A Comprehensive Survey with Quantitative Comparison of Image Analysis Methods for Microorganism Biovolume Measurements
title_full A Comprehensive Survey with Quantitative Comparison of Image Analysis Methods for Microorganism Biovolume Measurements
title_fullStr A Comprehensive Survey with Quantitative Comparison of Image Analysis Methods for Microorganism Biovolume Measurements
title_full_unstemmed A Comprehensive Survey with Quantitative Comparison of Image Analysis Methods for Microorganism Biovolume Measurements
title_short A Comprehensive Survey with Quantitative Comparison of Image Analysis Methods for Microorganism Biovolume Measurements
title_sort comprehensive survey with quantitative comparison of image analysis methods for microorganism biovolume measurements
topic Survey Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9446599/
https://www.ncbi.nlm.nih.gov/pubmed/36091717
http://dx.doi.org/10.1007/s11831-022-09811-x
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