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A multi-type branching process model for epidemics with application to COVID-19

In this paper we model an infectious disease epidemic using Multi-type Branching Process where the number of offsprings of different types follow non-identical Poisson distributions whose parameters may vary over time. We allow for variation in parameters due to the behavior of citizens, government...

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Detalles Bibliográficos
Autores principales: Laha, Arnab Kumar, Majumdar, Sourav
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9446622/
https://www.ncbi.nlm.nih.gov/pubmed/36092539
http://dx.doi.org/10.1007/s00477-022-02298-9
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author Laha, Arnab Kumar
Majumdar, Sourav
author_facet Laha, Arnab Kumar
Majumdar, Sourav
author_sort Laha, Arnab Kumar
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description In this paper we model an infectious disease epidemic using Multi-type Branching Process where the number of offsprings of different types follow non-identical Poisson distributions whose parameters may vary over time. We allow for variation in parameters due to the behavior of citizens, government interventions in the form of lockdown, testing and contact tracing and the infectiousness of the variant of the virus in circulation at a time-point in a location. The model can be used to estimate several unknown quantities of interest in an epidemic such as the number of undetected cases and number of people quarantined following contact tracing. The model is fitted to the publicly available COVID-19 caseload data of India, South Korea, UK and US and is seen to provide good fit. It also provides good short-term forecast of the caseload for these countries. This model can be useful for health policy planners in assessing the impact of various intervention strategies such as testing, contact tracing, quarantine etc.
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spelling pubmed-94466222022-09-06 A multi-type branching process model for epidemics with application to COVID-19 Laha, Arnab Kumar Majumdar, Sourav Stoch Environ Res Risk Assess Original Paper In this paper we model an infectious disease epidemic using Multi-type Branching Process where the number of offsprings of different types follow non-identical Poisson distributions whose parameters may vary over time. We allow for variation in parameters due to the behavior of citizens, government interventions in the form of lockdown, testing and contact tracing and the infectiousness of the variant of the virus in circulation at a time-point in a location. The model can be used to estimate several unknown quantities of interest in an epidemic such as the number of undetected cases and number of people quarantined following contact tracing. The model is fitted to the publicly available COVID-19 caseload data of India, South Korea, UK and US and is seen to provide good fit. It also provides good short-term forecast of the caseload for these countries. This model can be useful for health policy planners in assessing the impact of various intervention strategies such as testing, contact tracing, quarantine etc. Springer Berlin Heidelberg 2022-09-06 2023 /pmc/articles/PMC9446622/ /pubmed/36092539 http://dx.doi.org/10.1007/s00477-022-02298-9 Text en © The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2022, Springer Nature or its licensor holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Original Paper
Laha, Arnab Kumar
Majumdar, Sourav
A multi-type branching process model for epidemics with application to COVID-19
title A multi-type branching process model for epidemics with application to COVID-19
title_full A multi-type branching process model for epidemics with application to COVID-19
title_fullStr A multi-type branching process model for epidemics with application to COVID-19
title_full_unstemmed A multi-type branching process model for epidemics with application to COVID-19
title_short A multi-type branching process model for epidemics with application to COVID-19
title_sort multi-type branching process model for epidemics with application to covid-19
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9446622/
https://www.ncbi.nlm.nih.gov/pubmed/36092539
http://dx.doi.org/10.1007/s00477-022-02298-9
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