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The complete chloroplast genome of Suaeda physophora Pall. (Chenopodiaceae)

Suaeda physophora Pall. (Chenopodiaceae) is a leaf succulent shrub species with potential usefulness as fodder for the desert animal. However, the phylogeny of S. physophora is lacking. Here, we sequenced and assembled a complete chloroplast genome of S. physophora and further reconstructed the phyl...

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Detalles Bibliográficos
Autores principales: Hu, Yanlin, Ren, Xueli, Zhang, Jiayin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9448367/
https://www.ncbi.nlm.nih.gov/pubmed/36082045
http://dx.doi.org/10.1080/23802359.2022.2115322
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author Hu, Yanlin
Ren, Xueli
Zhang, Jiayin
author_facet Hu, Yanlin
Ren, Xueli
Zhang, Jiayin
author_sort Hu, Yanlin
collection PubMed
description Suaeda physophora Pall. (Chenopodiaceae) is a leaf succulent shrub species with potential usefulness as fodder for the desert animal. However, the phylogeny of S. physophora is lacking. Here, we sequenced and assembled a complete chloroplast genome of S. physophora and further reconstructed the phylogeny of Chenopodiaceae. The chloroplast genome of S. physophora is 151,104 bp in length, consisting of an 18,597 bp small single-copy (SSC), an 82,845 bp large single-copy (LSC), and a pair of 24,831 bp inverted repeat (IR) regions. The genome encodes 131 genes, including 87 protein-coding genes, 36 tRNA genes, and eight rRNA genes. Phylogenetic analysis revealed that the genus Suaeda forms a monophyletic taxon, and S. physophora is closely related to S. eltonica. Chloroplast genome and phylogenetic studies provided an essential foundation for the conservation of S. physophora.
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spelling pubmed-94483672022-09-07 The complete chloroplast genome of Suaeda physophora Pall. (Chenopodiaceae) Hu, Yanlin Ren, Xueli Zhang, Jiayin Mitochondrial DNA B Resour Mitogenome Announcement Suaeda physophora Pall. (Chenopodiaceae) is a leaf succulent shrub species with potential usefulness as fodder for the desert animal. However, the phylogeny of S. physophora is lacking. Here, we sequenced and assembled a complete chloroplast genome of S. physophora and further reconstructed the phylogeny of Chenopodiaceae. The chloroplast genome of S. physophora is 151,104 bp in length, consisting of an 18,597 bp small single-copy (SSC), an 82,845 bp large single-copy (LSC), and a pair of 24,831 bp inverted repeat (IR) regions. The genome encodes 131 genes, including 87 protein-coding genes, 36 tRNA genes, and eight rRNA genes. Phylogenetic analysis revealed that the genus Suaeda forms a monophyletic taxon, and S. physophora is closely related to S. eltonica. Chloroplast genome and phylogenetic studies provided an essential foundation for the conservation of S. physophora. Taylor & Francis 2022-09-02 /pmc/articles/PMC9448367/ /pubmed/36082045 http://dx.doi.org/10.1080/23802359.2022.2115322 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Hu, Yanlin
Ren, Xueli
Zhang, Jiayin
The complete chloroplast genome of Suaeda physophora Pall. (Chenopodiaceae)
title The complete chloroplast genome of Suaeda physophora Pall. (Chenopodiaceae)
title_full The complete chloroplast genome of Suaeda physophora Pall. (Chenopodiaceae)
title_fullStr The complete chloroplast genome of Suaeda physophora Pall. (Chenopodiaceae)
title_full_unstemmed The complete chloroplast genome of Suaeda physophora Pall. (Chenopodiaceae)
title_short The complete chloroplast genome of Suaeda physophora Pall. (Chenopodiaceae)
title_sort complete chloroplast genome of suaeda physophora pall. (chenopodiaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9448367/
https://www.ncbi.nlm.nih.gov/pubmed/36082045
http://dx.doi.org/10.1080/23802359.2022.2115322
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