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The complete chloroplast genome of Suaeda physophora Pall. (Chenopodiaceae)
Suaeda physophora Pall. (Chenopodiaceae) is a leaf succulent shrub species with potential usefulness as fodder for the desert animal. However, the phylogeny of S. physophora is lacking. Here, we sequenced and assembled a complete chloroplast genome of S. physophora and further reconstructed the phyl...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9448367/ https://www.ncbi.nlm.nih.gov/pubmed/36082045 http://dx.doi.org/10.1080/23802359.2022.2115322 |
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author | Hu, Yanlin Ren, Xueli Zhang, Jiayin |
author_facet | Hu, Yanlin Ren, Xueli Zhang, Jiayin |
author_sort | Hu, Yanlin |
collection | PubMed |
description | Suaeda physophora Pall. (Chenopodiaceae) is a leaf succulent shrub species with potential usefulness as fodder for the desert animal. However, the phylogeny of S. physophora is lacking. Here, we sequenced and assembled a complete chloroplast genome of S. physophora and further reconstructed the phylogeny of Chenopodiaceae. The chloroplast genome of S. physophora is 151,104 bp in length, consisting of an 18,597 bp small single-copy (SSC), an 82,845 bp large single-copy (LSC), and a pair of 24,831 bp inverted repeat (IR) regions. The genome encodes 131 genes, including 87 protein-coding genes, 36 tRNA genes, and eight rRNA genes. Phylogenetic analysis revealed that the genus Suaeda forms a monophyletic taxon, and S. physophora is closely related to S. eltonica. Chloroplast genome and phylogenetic studies provided an essential foundation for the conservation of S. physophora. |
format | Online Article Text |
id | pubmed-9448367 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-94483672022-09-07 The complete chloroplast genome of Suaeda physophora Pall. (Chenopodiaceae) Hu, Yanlin Ren, Xueli Zhang, Jiayin Mitochondrial DNA B Resour Mitogenome Announcement Suaeda physophora Pall. (Chenopodiaceae) is a leaf succulent shrub species with potential usefulness as fodder for the desert animal. However, the phylogeny of S. physophora is lacking. Here, we sequenced and assembled a complete chloroplast genome of S. physophora and further reconstructed the phylogeny of Chenopodiaceae. The chloroplast genome of S. physophora is 151,104 bp in length, consisting of an 18,597 bp small single-copy (SSC), an 82,845 bp large single-copy (LSC), and a pair of 24,831 bp inverted repeat (IR) regions. The genome encodes 131 genes, including 87 protein-coding genes, 36 tRNA genes, and eight rRNA genes. Phylogenetic analysis revealed that the genus Suaeda forms a monophyletic taxon, and S. physophora is closely related to S. eltonica. Chloroplast genome and phylogenetic studies provided an essential foundation for the conservation of S. physophora. Taylor & Francis 2022-09-02 /pmc/articles/PMC9448367/ /pubmed/36082045 http://dx.doi.org/10.1080/23802359.2022.2115322 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Hu, Yanlin Ren, Xueli Zhang, Jiayin The complete chloroplast genome of Suaeda physophora Pall. (Chenopodiaceae) |
title | The complete chloroplast genome of Suaeda physophora Pall. (Chenopodiaceae) |
title_full | The complete chloroplast genome of Suaeda physophora Pall. (Chenopodiaceae) |
title_fullStr | The complete chloroplast genome of Suaeda physophora Pall. (Chenopodiaceae) |
title_full_unstemmed | The complete chloroplast genome of Suaeda physophora Pall. (Chenopodiaceae) |
title_short | The complete chloroplast genome of Suaeda physophora Pall. (Chenopodiaceae) |
title_sort | complete chloroplast genome of suaeda physophora pall. (chenopodiaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9448367/ https://www.ncbi.nlm.nih.gov/pubmed/36082045 http://dx.doi.org/10.1080/23802359.2022.2115322 |
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