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The complete chloroplast genome of Verbascum thapsus L. (Scrophulariaceae) and its phylogenetic affinities
Verbascum thapsus L. has extensive pharmacological effects, including antioxidative and antineoplastic action, memory improvement and neuroprotection. However, its phylogenetic position is not established in Scrophulariaceae. In this study, we reported the complete chloroplast genome sequence of V....
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9448373/ https://www.ncbi.nlm.nih.gov/pubmed/36082042 http://dx.doi.org/10.1080/23802359.2022.2113749 |
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author | Zhang, Yue Guan, Yun-Hui Pu, Cheng-Zhao Xi, Yi-Jia Tao, Ai-en Xia, Cong-Long |
author_facet | Zhang, Yue Guan, Yun-Hui Pu, Cheng-Zhao Xi, Yi-Jia Tao, Ai-en Xia, Cong-Long |
author_sort | Zhang, Yue |
collection | PubMed |
description | Verbascum thapsus L. has extensive pharmacological effects, including antioxidative and antineoplastic action, memory improvement and neuroprotection. However, its phylogenetic position is not established in Scrophulariaceae. In this study, we reported the complete chloroplast genome sequence of V. thapsus L. for the first time and investigate its phylogenetic relationship in Scrophulariaceae. The assembled chloroplast genome is a circular 153,338 bp sequence, including a large single copy (LSC) region of 84,627 bp, a small single copy (SSC) region of 17,829 bp and a pair of inverted repeats (IRs) of 25,441 bp. The genome contains 135 genes, including 86 protein coding genes, 37 tRNA genes, and eight rRNA genes. The phylogenetic tree showed that V. thapsus is closely associated with V. chinense and V. phoeniceum. |
format | Online Article Text |
id | pubmed-9448373 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-94483732022-09-07 The complete chloroplast genome of Verbascum thapsus L. (Scrophulariaceae) and its phylogenetic affinities Zhang, Yue Guan, Yun-Hui Pu, Cheng-Zhao Xi, Yi-Jia Tao, Ai-en Xia, Cong-Long Mitochondrial DNA B Resour Mitogenome Announcement Verbascum thapsus L. has extensive pharmacological effects, including antioxidative and antineoplastic action, memory improvement and neuroprotection. However, its phylogenetic position is not established in Scrophulariaceae. In this study, we reported the complete chloroplast genome sequence of V. thapsus L. for the first time and investigate its phylogenetic relationship in Scrophulariaceae. The assembled chloroplast genome is a circular 153,338 bp sequence, including a large single copy (LSC) region of 84,627 bp, a small single copy (SSC) region of 17,829 bp and a pair of inverted repeats (IRs) of 25,441 bp. The genome contains 135 genes, including 86 protein coding genes, 37 tRNA genes, and eight rRNA genes. The phylogenetic tree showed that V. thapsus is closely associated with V. chinense and V. phoeniceum. Taylor & Francis 2022-09-02 /pmc/articles/PMC9448373/ /pubmed/36082042 http://dx.doi.org/10.1080/23802359.2022.2113749 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Zhang, Yue Guan, Yun-Hui Pu, Cheng-Zhao Xi, Yi-Jia Tao, Ai-en Xia, Cong-Long The complete chloroplast genome of Verbascum thapsus L. (Scrophulariaceae) and its phylogenetic affinities |
title | The complete chloroplast genome of Verbascum thapsus L. (Scrophulariaceae) and its phylogenetic affinities |
title_full | The complete chloroplast genome of Verbascum thapsus L. (Scrophulariaceae) and its phylogenetic affinities |
title_fullStr | The complete chloroplast genome of Verbascum thapsus L. (Scrophulariaceae) and its phylogenetic affinities |
title_full_unstemmed | The complete chloroplast genome of Verbascum thapsus L. (Scrophulariaceae) and its phylogenetic affinities |
title_short | The complete chloroplast genome of Verbascum thapsus L. (Scrophulariaceae) and its phylogenetic affinities |
title_sort | complete chloroplast genome of verbascum thapsus l. (scrophulariaceae) and its phylogenetic affinities |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9448373/ https://www.ncbi.nlm.nih.gov/pubmed/36082042 http://dx.doi.org/10.1080/23802359.2022.2113749 |
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