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The complete chloroplast genome of Verbascum thapsus L. (Scrophulariaceae) and its phylogenetic affinities

Verbascum thapsus L. has extensive pharmacological effects, including antioxidative and antineoplastic action, memory improvement and neuroprotection. However, its phylogenetic position is not established in Scrophulariaceae. In this study, we reported the complete chloroplast genome sequence of V....

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Autores principales: Zhang, Yue, Guan, Yun-Hui, Pu, Cheng-Zhao, Xi, Yi-Jia, Tao, Ai-en, Xia, Cong-Long
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9448373/
https://www.ncbi.nlm.nih.gov/pubmed/36082042
http://dx.doi.org/10.1080/23802359.2022.2113749
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author Zhang, Yue
Guan, Yun-Hui
Pu, Cheng-Zhao
Xi, Yi-Jia
Tao, Ai-en
Xia, Cong-Long
author_facet Zhang, Yue
Guan, Yun-Hui
Pu, Cheng-Zhao
Xi, Yi-Jia
Tao, Ai-en
Xia, Cong-Long
author_sort Zhang, Yue
collection PubMed
description Verbascum thapsus L. has extensive pharmacological effects, including antioxidative and antineoplastic action, memory improvement and neuroprotection. However, its phylogenetic position is not established in Scrophulariaceae. In this study, we reported the complete chloroplast genome sequence of V. thapsus L. for the first time and investigate its phylogenetic relationship in Scrophulariaceae. The assembled chloroplast genome is a circular 153,338 bp sequence, including a large single copy (LSC) region of 84,627 bp, a small single copy (SSC) region of 17,829 bp and a pair of inverted repeats (IRs) of 25,441 bp. The genome contains 135 genes, including 86 protein coding genes, 37 tRNA genes, and eight rRNA genes. The phylogenetic tree showed that V. thapsus is closely associated with V. chinense and V. phoeniceum.
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spelling pubmed-94483732022-09-07 The complete chloroplast genome of Verbascum thapsus L. (Scrophulariaceae) and its phylogenetic affinities Zhang, Yue Guan, Yun-Hui Pu, Cheng-Zhao Xi, Yi-Jia Tao, Ai-en Xia, Cong-Long Mitochondrial DNA B Resour Mitogenome Announcement Verbascum thapsus L. has extensive pharmacological effects, including antioxidative and antineoplastic action, memory improvement and neuroprotection. However, its phylogenetic position is not established in Scrophulariaceae. In this study, we reported the complete chloroplast genome sequence of V. thapsus L. for the first time and investigate its phylogenetic relationship in Scrophulariaceae. The assembled chloroplast genome is a circular 153,338 bp sequence, including a large single copy (LSC) region of 84,627 bp, a small single copy (SSC) region of 17,829 bp and a pair of inverted repeats (IRs) of 25,441 bp. The genome contains 135 genes, including 86 protein coding genes, 37 tRNA genes, and eight rRNA genes. The phylogenetic tree showed that V. thapsus is closely associated with V. chinense and V. phoeniceum. Taylor & Francis 2022-09-02 /pmc/articles/PMC9448373/ /pubmed/36082042 http://dx.doi.org/10.1080/23802359.2022.2113749 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Yue
Guan, Yun-Hui
Pu, Cheng-Zhao
Xi, Yi-Jia
Tao, Ai-en
Xia, Cong-Long
The complete chloroplast genome of Verbascum thapsus L. (Scrophulariaceae) and its phylogenetic affinities
title The complete chloroplast genome of Verbascum thapsus L. (Scrophulariaceae) and its phylogenetic affinities
title_full The complete chloroplast genome of Verbascum thapsus L. (Scrophulariaceae) and its phylogenetic affinities
title_fullStr The complete chloroplast genome of Verbascum thapsus L. (Scrophulariaceae) and its phylogenetic affinities
title_full_unstemmed The complete chloroplast genome of Verbascum thapsus L. (Scrophulariaceae) and its phylogenetic affinities
title_short The complete chloroplast genome of Verbascum thapsus L. (Scrophulariaceae) and its phylogenetic affinities
title_sort complete chloroplast genome of verbascum thapsus l. (scrophulariaceae) and its phylogenetic affinities
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9448373/
https://www.ncbi.nlm.nih.gov/pubmed/36082042
http://dx.doi.org/10.1080/23802359.2022.2113749
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