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Complete mitochondrial genome sequence of Pulveroboletus ravenelii (Boletales, Basidiomycota)
Pulveroboletus ravenelii, an ectomycorrhizal fungus, has long been used in traditional Chinese medicine and mushroom dyes; however, its mitogenome and phylogenetic relationship with other taxa remain unexplored. Here, we sequenced the mitochondrial genome of P. ravenelii using next-generation sequen...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9448388/ https://www.ncbi.nlm.nih.gov/pubmed/36082043 http://dx.doi.org/10.1080/23802359.2022.2110006 |
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author | Cho, Sung-Eun Kwag, Young-Nam Han, Sang-Kuk Lee, Dong-Hyeon Kim, Chang Sun |
author_facet | Cho, Sung-Eun Kwag, Young-Nam Han, Sang-Kuk Lee, Dong-Hyeon Kim, Chang Sun |
author_sort | Cho, Sung-Eun |
collection | PubMed |
description | Pulveroboletus ravenelii, an ectomycorrhizal fungus, has long been used in traditional Chinese medicine and mushroom dyes; however, its mitogenome and phylogenetic relationship with other taxa remain unexplored. Here, we sequenced the mitochondrial genome of P. ravenelii using next-generation sequencing and found that its mitogenome, a circular DNA molecule of 43,528 bp, comprised 15 protein-coding genes, 15 transfer RNA genes, and two ribosomal RNA genes. The mitogenome had a base composition of A (37.52%), C (11.14%), G (12.21%), and T (39.13%) and a GC content of 23.35%. A phylogenetic tree was constructed to determine the phylogenetic relationship of this species with other taxa based on the mitochondrial genome sequence. This study revealed the phylogenetic positions of P. ravenelii and its related genera for the first time. |
format | Online Article Text |
id | pubmed-9448388 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-94483882022-09-07 Complete mitochondrial genome sequence of Pulveroboletus ravenelii (Boletales, Basidiomycota) Cho, Sung-Eun Kwag, Young-Nam Han, Sang-Kuk Lee, Dong-Hyeon Kim, Chang Sun Mitochondrial DNA B Resour Mitogenome Announcement Pulveroboletus ravenelii, an ectomycorrhizal fungus, has long been used in traditional Chinese medicine and mushroom dyes; however, its mitogenome and phylogenetic relationship with other taxa remain unexplored. Here, we sequenced the mitochondrial genome of P. ravenelii using next-generation sequencing and found that its mitogenome, a circular DNA molecule of 43,528 bp, comprised 15 protein-coding genes, 15 transfer RNA genes, and two ribosomal RNA genes. The mitogenome had a base composition of A (37.52%), C (11.14%), G (12.21%), and T (39.13%) and a GC content of 23.35%. A phylogenetic tree was constructed to determine the phylogenetic relationship of this species with other taxa based on the mitochondrial genome sequence. This study revealed the phylogenetic positions of P. ravenelii and its related genera for the first time. Taylor & Francis 2022-09-02 /pmc/articles/PMC9448388/ /pubmed/36082043 http://dx.doi.org/10.1080/23802359.2022.2110006 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Cho, Sung-Eun Kwag, Young-Nam Han, Sang-Kuk Lee, Dong-Hyeon Kim, Chang Sun Complete mitochondrial genome sequence of Pulveroboletus ravenelii (Boletales, Basidiomycota) |
title | Complete mitochondrial genome sequence of Pulveroboletus ravenelii (Boletales, Basidiomycota) |
title_full | Complete mitochondrial genome sequence of Pulveroboletus ravenelii (Boletales, Basidiomycota) |
title_fullStr | Complete mitochondrial genome sequence of Pulveroboletus ravenelii (Boletales, Basidiomycota) |
title_full_unstemmed | Complete mitochondrial genome sequence of Pulveroboletus ravenelii (Boletales, Basidiomycota) |
title_short | Complete mitochondrial genome sequence of Pulveroboletus ravenelii (Boletales, Basidiomycota) |
title_sort | complete mitochondrial genome sequence of pulveroboletus ravenelii (boletales, basidiomycota) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9448388/ https://www.ncbi.nlm.nih.gov/pubmed/36082043 http://dx.doi.org/10.1080/23802359.2022.2110006 |
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