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Complete mitochondrial genome sequence of Pulveroboletus ravenelii (Boletales, Basidiomycota)

Pulveroboletus ravenelii, an ectomycorrhizal fungus, has long been used in traditional Chinese medicine and mushroom dyes; however, its mitogenome and phylogenetic relationship with other taxa remain unexplored. Here, we sequenced the mitochondrial genome of P. ravenelii using next-generation sequen...

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Autores principales: Cho, Sung-Eun, Kwag, Young-Nam, Han, Sang-Kuk, Lee, Dong-Hyeon, Kim, Chang Sun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9448388/
https://www.ncbi.nlm.nih.gov/pubmed/36082043
http://dx.doi.org/10.1080/23802359.2022.2110006
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author Cho, Sung-Eun
Kwag, Young-Nam
Han, Sang-Kuk
Lee, Dong-Hyeon
Kim, Chang Sun
author_facet Cho, Sung-Eun
Kwag, Young-Nam
Han, Sang-Kuk
Lee, Dong-Hyeon
Kim, Chang Sun
author_sort Cho, Sung-Eun
collection PubMed
description Pulveroboletus ravenelii, an ectomycorrhizal fungus, has long been used in traditional Chinese medicine and mushroom dyes; however, its mitogenome and phylogenetic relationship with other taxa remain unexplored. Here, we sequenced the mitochondrial genome of P. ravenelii using next-generation sequencing and found that its mitogenome, a circular DNA molecule of 43,528 bp, comprised 15 protein-coding genes, 15 transfer RNA genes, and two ribosomal RNA genes. The mitogenome had a base composition of A (37.52%), C (11.14%), G (12.21%), and T (39.13%) and a GC content of 23.35%. A phylogenetic tree was constructed to determine the phylogenetic relationship of this species with other taxa based on the mitochondrial genome sequence. This study revealed the phylogenetic positions of P. ravenelii and its related genera for the first time.
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spelling pubmed-94483882022-09-07 Complete mitochondrial genome sequence of Pulveroboletus ravenelii (Boletales, Basidiomycota) Cho, Sung-Eun Kwag, Young-Nam Han, Sang-Kuk Lee, Dong-Hyeon Kim, Chang Sun Mitochondrial DNA B Resour Mitogenome Announcement Pulveroboletus ravenelii, an ectomycorrhizal fungus, has long been used in traditional Chinese medicine and mushroom dyes; however, its mitogenome and phylogenetic relationship with other taxa remain unexplored. Here, we sequenced the mitochondrial genome of P. ravenelii using next-generation sequencing and found that its mitogenome, a circular DNA molecule of 43,528 bp, comprised 15 protein-coding genes, 15 transfer RNA genes, and two ribosomal RNA genes. The mitogenome had a base composition of A (37.52%), C (11.14%), G (12.21%), and T (39.13%) and a GC content of 23.35%. A phylogenetic tree was constructed to determine the phylogenetic relationship of this species with other taxa based on the mitochondrial genome sequence. This study revealed the phylogenetic positions of P. ravenelii and its related genera for the first time. Taylor & Francis 2022-09-02 /pmc/articles/PMC9448388/ /pubmed/36082043 http://dx.doi.org/10.1080/23802359.2022.2110006 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Cho, Sung-Eun
Kwag, Young-Nam
Han, Sang-Kuk
Lee, Dong-Hyeon
Kim, Chang Sun
Complete mitochondrial genome sequence of Pulveroboletus ravenelii (Boletales, Basidiomycota)
title Complete mitochondrial genome sequence of Pulveroboletus ravenelii (Boletales, Basidiomycota)
title_full Complete mitochondrial genome sequence of Pulveroboletus ravenelii (Boletales, Basidiomycota)
title_fullStr Complete mitochondrial genome sequence of Pulveroboletus ravenelii (Boletales, Basidiomycota)
title_full_unstemmed Complete mitochondrial genome sequence of Pulveroboletus ravenelii (Boletales, Basidiomycota)
title_short Complete mitochondrial genome sequence of Pulveroboletus ravenelii (Boletales, Basidiomycota)
title_sort complete mitochondrial genome sequence of pulveroboletus ravenelii (boletales, basidiomycota)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9448388/
https://www.ncbi.nlm.nih.gov/pubmed/36082043
http://dx.doi.org/10.1080/23802359.2022.2110006
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