The complete chloroplast genome of Miliusa glochidioides (Annonaceae) and phylogenetic analysis

The chloroplast (cp) genome of Miliusa glochidioides has been fully sequenced. The cp genome of this species has a typical quadripartite structure comprised of four parts: a large single copy (LSC; 88,782 bp) region, a small single copy (SSC; 18,949 bp) region, and two inverted repeat (IR; 26,029 bp...

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Autores principales: Gan, Yangying, Zhang, Qi, Ping, Jingyao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Plastome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9448393/
https://www.ncbi.nlm.nih.gov/pubmed/36082039
http://dx.doi.org/10.1080/23802359.2022.2116947
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author Gan, Yangying
Zhang, Qi
Ping, Jingyao
author_facet Gan, Yangying
Zhang, Qi
Ping, Jingyao
author_sort Gan, Yangying
collection PubMed
description The chloroplast (cp) genome of Miliusa glochidioides has been fully sequenced. The cp genome of this species has a typical quadripartite structure comprised of four parts: a large single copy (LSC; 88,782 bp) region, a small single copy (SSC; 18,949 bp) region, and two inverted repeat (IR; 26,029 bp each) regions. The full length of the cp genome is 159,789 bp; its GC content is 36.7%, and it encodes a total of 129 genes including 84 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Among the protein-coding genes, nine (rps16, rpl2, rpl16, atpF, rpoC1, petB, petD, ndhA, and ndhB) contain one intron, and three (rps12, clpP, and ycf3) have two introns. A maximum-likelihood (ML) phylogenetic tree shows that M. glochidioides is a sister to Chieniodendron hainanense.
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spelling pubmed-94483932022-09-07 The complete chloroplast genome of Miliusa glochidioides (Annonaceae) and phylogenetic analysis Gan, Yangying Zhang, Qi Ping, Jingyao Mitochondrial DNA B Resour Plastome Announcement The chloroplast (cp) genome of Miliusa glochidioides has been fully sequenced. The cp genome of this species has a typical quadripartite structure comprised of four parts: a large single copy (LSC; 88,782 bp) region, a small single copy (SSC; 18,949 bp) region, and two inverted repeat (IR; 26,029 bp each) regions. The full length of the cp genome is 159,789 bp; its GC content is 36.7%, and it encodes a total of 129 genes including 84 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Among the protein-coding genes, nine (rps16, rpl2, rpl16, atpF, rpoC1, petB, petD, ndhA, and ndhB) contain one intron, and three (rps12, clpP, and ycf3) have two introns. A maximum-likelihood (ML) phylogenetic tree shows that M. glochidioides is a sister to Chieniodendron hainanense. Taylor & Francis 2022-09-05 /pmc/articles/PMC9448393/ /pubmed/36082039 http://dx.doi.org/10.1080/23802359.2022.2116947 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Gan, Yangying
Zhang, Qi
Ping, Jingyao
The complete chloroplast genome of Miliusa glochidioides (Annonaceae) and phylogenetic analysis
title The complete chloroplast genome of Miliusa glochidioides (Annonaceae) and phylogenetic analysis
title_full The complete chloroplast genome of Miliusa glochidioides (Annonaceae) and phylogenetic analysis
title_fullStr The complete chloroplast genome of Miliusa glochidioides (Annonaceae) and phylogenetic analysis
title_full_unstemmed The complete chloroplast genome of Miliusa glochidioides (Annonaceae) and phylogenetic analysis
title_short The complete chloroplast genome of Miliusa glochidioides (Annonaceae) and phylogenetic analysis
title_sort complete chloroplast genome of miliusa glochidioides (annonaceae) and phylogenetic analysis
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9448393/
https://www.ncbi.nlm.nih.gov/pubmed/36082039
http://dx.doi.org/10.1080/23802359.2022.2116947
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