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Novel miniaturized fluorescence loop-mediated isothermal amplification detection system for rapid on-site virus detection

New pathogen outbreaks have progressed rapidly and are highly infectious in recent years, increasing the urgency of rapid and accurate detection of pathogenic microorganisms. Based on the point-of-care testing (POCT) requirements, in this study, a real-time fluorescent loop-mediated isothermal ampli...

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Autores principales: Wu, Yanqi, Bai, Liping, Ye, Chengfu, Yuhong Guan, Kunming Yan, Chen, Hui, Jiang, Zhihong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9448916/
https://www.ncbi.nlm.nih.gov/pubmed/36091427
http://dx.doi.org/10.3389/fbioe.2022.964244
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author Wu, Yanqi
Bai, Liping
Ye, Chengfu
Yuhong Guan,
Kunming Yan,
Chen, Hui
Jiang, Zhihong
author_facet Wu, Yanqi
Bai, Liping
Ye, Chengfu
Yuhong Guan,
Kunming Yan,
Chen, Hui
Jiang, Zhihong
author_sort Wu, Yanqi
collection PubMed
description New pathogen outbreaks have progressed rapidly and are highly infectious in recent years, increasing the urgency of rapid and accurate detection of pathogenic microorganisms. Based on the point-of-care testing (POCT) requirements, in this study, a real-time fluorescent loop-mediated isothermal amplification (LAMP) detection system was developed and applied to pathogen detection. The system is compact and portable, with good uniformity and reproducibility, and it can detect pathogens rapidly and effectively. For norovirus detection, the linear range was 10(0)–10(6) copies/μL. The system can achieve the theoretical sensitivity of LAMP detection, conclusions could be obtained within 35 min, and quantitative detection was possible. The test results of 45 clinical samples were consistent with quantitative PCR (qPCR) and clinical results, and the accuracy could reach 100%. This system has the characteristics of portability, speed, and POCT accuracy, and the cost is much lower than that of commercial qPCR. Therefore, it is suitable for remote areas or places with relatively poor conditions and environments requiring on-site conditions. It can also be widely used to detect various epidemics and unexpected diseases.
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spelling pubmed-94489162022-09-08 Novel miniaturized fluorescence loop-mediated isothermal amplification detection system for rapid on-site virus detection Wu, Yanqi Bai, Liping Ye, Chengfu Yuhong Guan, Kunming Yan, Chen, Hui Jiang, Zhihong Front Bioeng Biotechnol Bioengineering and Biotechnology New pathogen outbreaks have progressed rapidly and are highly infectious in recent years, increasing the urgency of rapid and accurate detection of pathogenic microorganisms. Based on the point-of-care testing (POCT) requirements, in this study, a real-time fluorescent loop-mediated isothermal amplification (LAMP) detection system was developed and applied to pathogen detection. The system is compact and portable, with good uniformity and reproducibility, and it can detect pathogens rapidly and effectively. For norovirus detection, the linear range was 10(0)–10(6) copies/μL. The system can achieve the theoretical sensitivity of LAMP detection, conclusions could be obtained within 35 min, and quantitative detection was possible. The test results of 45 clinical samples were consistent with quantitative PCR (qPCR) and clinical results, and the accuracy could reach 100%. This system has the characteristics of portability, speed, and POCT accuracy, and the cost is much lower than that of commercial qPCR. Therefore, it is suitable for remote areas or places with relatively poor conditions and environments requiring on-site conditions. It can also be widely used to detect various epidemics and unexpected diseases. Frontiers Media S.A. 2022-08-24 /pmc/articles/PMC9448916/ /pubmed/36091427 http://dx.doi.org/10.3389/fbioe.2022.964244 Text en Copyright © 2022 Wu, Bai, Ye, Yuhong Guan, Kunming Yan, Chen and Jiang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Bioengineering and Biotechnology
Wu, Yanqi
Bai, Liping
Ye, Chengfu
Yuhong Guan,
Kunming Yan,
Chen, Hui
Jiang, Zhihong
Novel miniaturized fluorescence loop-mediated isothermal amplification detection system for rapid on-site virus detection
title Novel miniaturized fluorescence loop-mediated isothermal amplification detection system for rapid on-site virus detection
title_full Novel miniaturized fluorescence loop-mediated isothermal amplification detection system for rapid on-site virus detection
title_fullStr Novel miniaturized fluorescence loop-mediated isothermal amplification detection system for rapid on-site virus detection
title_full_unstemmed Novel miniaturized fluorescence loop-mediated isothermal amplification detection system for rapid on-site virus detection
title_short Novel miniaturized fluorescence loop-mediated isothermal amplification detection system for rapid on-site virus detection
title_sort novel miniaturized fluorescence loop-mediated isothermal amplification detection system for rapid on-site virus detection
topic Bioengineering and Biotechnology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9448916/
https://www.ncbi.nlm.nih.gov/pubmed/36091427
http://dx.doi.org/10.3389/fbioe.2022.964244
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