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Quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma
Diffuse midline gliomas (DMGs) are highly aggressive, incurable childhood brain tumors. They present a clinical challenge due to many factors, including heterogeneity and diffuse infiltration, complicating disease management. Recent studies have described the existence of subclonal populations that...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cell Press
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9449134/ https://www.ncbi.nlm.nih.gov/pubmed/36044867 http://dx.doi.org/10.1016/j.celrep.2022.111283 |
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author | Tari, Haider Kessler, Ketty Trahearn, Nick Werner, Benjamin Vinci, Maria Jones, Chris Sottoriva, Andrea |
author_facet | Tari, Haider Kessler, Ketty Trahearn, Nick Werner, Benjamin Vinci, Maria Jones, Chris Sottoriva, Andrea |
author_sort | Tari, Haider |
collection | PubMed |
description | Diffuse midline gliomas (DMGs) are highly aggressive, incurable childhood brain tumors. They present a clinical challenge due to many factors, including heterogeneity and diffuse infiltration, complicating disease management. Recent studies have described the existence of subclonal populations that may co-operate to drive pro-tumorigenic processes such as cellular invasion. However, a precise quantification of subclonal interactions is lacking, a problem that extends to other cancers. In this study, we combine spatial computational modeling of cellular interactions during invasion with co-evolution experiments of clonally disassembled patient-derived DMG cells. We design a Bayesian inference framework to quantify spatial subclonal interactions between molecular and phenotypically distinct lineages with different patterns of invasion. We show how this approach could discriminate genuine interactions, where one clone enhanced the invasive phenotype of another, from those apparently only due to the complex dynamics of spatially restricted growth. This study provides a framework for the quantification of subclonal interactions in DMG. |
format | Online Article Text |
id | pubmed-9449134 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Cell Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-94491342022-09-09 Quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma Tari, Haider Kessler, Ketty Trahearn, Nick Werner, Benjamin Vinci, Maria Jones, Chris Sottoriva, Andrea Cell Rep Article Diffuse midline gliomas (DMGs) are highly aggressive, incurable childhood brain tumors. They present a clinical challenge due to many factors, including heterogeneity and diffuse infiltration, complicating disease management. Recent studies have described the existence of subclonal populations that may co-operate to drive pro-tumorigenic processes such as cellular invasion. However, a precise quantification of subclonal interactions is lacking, a problem that extends to other cancers. In this study, we combine spatial computational modeling of cellular interactions during invasion with co-evolution experiments of clonally disassembled patient-derived DMG cells. We design a Bayesian inference framework to quantify spatial subclonal interactions between molecular and phenotypically distinct lineages with different patterns of invasion. We show how this approach could discriminate genuine interactions, where one clone enhanced the invasive phenotype of another, from those apparently only due to the complex dynamics of spatially restricted growth. This study provides a framework for the quantification of subclonal interactions in DMG. Cell Press 2022-08-30 /pmc/articles/PMC9449134/ /pubmed/36044867 http://dx.doi.org/10.1016/j.celrep.2022.111283 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Tari, Haider Kessler, Ketty Trahearn, Nick Werner, Benjamin Vinci, Maria Jones, Chris Sottoriva, Andrea Quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma |
title | Quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma |
title_full | Quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma |
title_fullStr | Quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma |
title_full_unstemmed | Quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma |
title_short | Quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma |
title_sort | quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9449134/ https://www.ncbi.nlm.nih.gov/pubmed/36044867 http://dx.doi.org/10.1016/j.celrep.2022.111283 |
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