Cargando…

Quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma

Diffuse midline gliomas (DMGs) are highly aggressive, incurable childhood brain tumors. They present a clinical challenge due to many factors, including heterogeneity and diffuse infiltration, complicating disease management. Recent studies have described the existence of subclonal populations that...

Descripción completa

Detalles Bibliográficos
Autores principales: Tari, Haider, Kessler, Ketty, Trahearn, Nick, Werner, Benjamin, Vinci, Maria, Jones, Chris, Sottoriva, Andrea
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cell Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9449134/
https://www.ncbi.nlm.nih.gov/pubmed/36044867
http://dx.doi.org/10.1016/j.celrep.2022.111283
_version_ 1784784225349664768
author Tari, Haider
Kessler, Ketty
Trahearn, Nick
Werner, Benjamin
Vinci, Maria
Jones, Chris
Sottoriva, Andrea
author_facet Tari, Haider
Kessler, Ketty
Trahearn, Nick
Werner, Benjamin
Vinci, Maria
Jones, Chris
Sottoriva, Andrea
author_sort Tari, Haider
collection PubMed
description Diffuse midline gliomas (DMGs) are highly aggressive, incurable childhood brain tumors. They present a clinical challenge due to many factors, including heterogeneity and diffuse infiltration, complicating disease management. Recent studies have described the existence of subclonal populations that may co-operate to drive pro-tumorigenic processes such as cellular invasion. However, a precise quantification of subclonal interactions is lacking, a problem that extends to other cancers. In this study, we combine spatial computational modeling of cellular interactions during invasion with co-evolution experiments of clonally disassembled patient-derived DMG cells. We design a Bayesian inference framework to quantify spatial subclonal interactions between molecular and phenotypically distinct lineages with different patterns of invasion. We show how this approach could discriminate genuine interactions, where one clone enhanced the invasive phenotype of another, from those apparently only due to the complex dynamics of spatially restricted growth. This study provides a framework for the quantification of subclonal interactions in DMG.
format Online
Article
Text
id pubmed-9449134
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Cell Press
record_format MEDLINE/PubMed
spelling pubmed-94491342022-09-09 Quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma Tari, Haider Kessler, Ketty Trahearn, Nick Werner, Benjamin Vinci, Maria Jones, Chris Sottoriva, Andrea Cell Rep Article Diffuse midline gliomas (DMGs) are highly aggressive, incurable childhood brain tumors. They present a clinical challenge due to many factors, including heterogeneity and diffuse infiltration, complicating disease management. Recent studies have described the existence of subclonal populations that may co-operate to drive pro-tumorigenic processes such as cellular invasion. However, a precise quantification of subclonal interactions is lacking, a problem that extends to other cancers. In this study, we combine spatial computational modeling of cellular interactions during invasion with co-evolution experiments of clonally disassembled patient-derived DMG cells. We design a Bayesian inference framework to quantify spatial subclonal interactions between molecular and phenotypically distinct lineages with different patterns of invasion. We show how this approach could discriminate genuine interactions, where one clone enhanced the invasive phenotype of another, from those apparently only due to the complex dynamics of spatially restricted growth. This study provides a framework for the quantification of subclonal interactions in DMG. Cell Press 2022-08-30 /pmc/articles/PMC9449134/ /pubmed/36044867 http://dx.doi.org/10.1016/j.celrep.2022.111283 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Tari, Haider
Kessler, Ketty
Trahearn, Nick
Werner, Benjamin
Vinci, Maria
Jones, Chris
Sottoriva, Andrea
Quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma
title Quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma
title_full Quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma
title_fullStr Quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma
title_full_unstemmed Quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma
title_short Quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma
title_sort quantification of spatial subclonal interactions enhancing the invasive phenotype of pediatric glioma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9449134/
https://www.ncbi.nlm.nih.gov/pubmed/36044867
http://dx.doi.org/10.1016/j.celrep.2022.111283
work_keys_str_mv AT tarihaider quantificationofspatialsubclonalinteractionsenhancingtheinvasivephenotypeofpediatricglioma
AT kesslerketty quantificationofspatialsubclonalinteractionsenhancingtheinvasivephenotypeofpediatricglioma
AT trahearnnick quantificationofspatialsubclonalinteractionsenhancingtheinvasivephenotypeofpediatricglioma
AT wernerbenjamin quantificationofspatialsubclonalinteractionsenhancingtheinvasivephenotypeofpediatricglioma
AT vincimaria quantificationofspatialsubclonalinteractionsenhancingtheinvasivephenotypeofpediatricglioma
AT joneschris quantificationofspatialsubclonalinteractionsenhancingtheinvasivephenotypeofpediatricglioma
AT sottorivaandrea quantificationofspatialsubclonalinteractionsenhancingtheinvasivephenotypeofpediatricglioma