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Transcriptome sequencing reveals differences between leydig cells and sertoli cells of yak
In this study, we detected the expression of mRNAs, lncRNAs, and miRNAs in primary cultured leydig cells (LCs) and sertoli cells (SCs) of yak by RNA sequencing technology. A total of 84 differently expression mRNAs (DEmRNAs) (LCs vs. SCs: 15 up and 69 down), 172 differently expression lncRNAs (DElnc...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9449347/ https://www.ncbi.nlm.nih.gov/pubmed/36090173 http://dx.doi.org/10.3389/fvets.2022.960250 |
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author | Wang, Yaying Pan, Yangyang Wang, Meng Afedo, Seth Yaw Zhao, Ling Han, Xiaohong Liu, Minqing Zhao, Tian Zhang, Tongxiang Ding, Tianyi Wang, Jinglei Cui, Yan Yu, Sijiu |
author_facet | Wang, Yaying Pan, Yangyang Wang, Meng Afedo, Seth Yaw Zhao, Ling Han, Xiaohong Liu, Minqing Zhao, Tian Zhang, Tongxiang Ding, Tianyi Wang, Jinglei Cui, Yan Yu, Sijiu |
author_sort | Wang, Yaying |
collection | PubMed |
description | In this study, we detected the expression of mRNAs, lncRNAs, and miRNAs in primary cultured leydig cells (LCs) and sertoli cells (SCs) of yak by RNA sequencing technology. A total of 84 differently expression mRNAs (DEmRNAs) (LCs vs. SCs: 15 up and 69 down), 172 differently expression lncRNAs (DElncRNAs) (LCs vs. SCs: 36 up and 136 down), and 90 differently expression miRNAs (DEmiRNAs) (LCs vs. SCs: 72 up and 18 down) were obtained between the two types of cells. GO enrichment and KEGG analysis indicated that the differential expression genes (DEGs) were more enriched in the regulation of actin cytoskeleton, Rap1/MAPK signaling pathway, steroid biosynthesis, focal adhesion, and pathways associated with metabolism. Targeted regulation relationship pairs of 3β-HSD and MSTRG.54630.1, CNTLN and MSTRG.19058.1, BRCA2 and MSTRG.28299.4, CA2 and novel-miR-148, and ceRNA network of LAMC3-MSTRG.68870.1- bta-miR-7862/novel-miR-151/novel-miR-148 were constructed by Cytoscape software. In conclusion, the differences between LCs and SCs were mainly reflected in steroid hormone synthesis, cell proliferation and metabolism, and blood-testicular barrier (BTB) dynamic regulation, and 3β-HSD, CNTLN, BRCA2, CA2, and LAMC3 may be the key factors causing these differences, which may be regulated by ncRNAs. This study provides a basic direction for exploring the differential regulation of LCs and SCs by ncRNAs. |
format | Online Article Text |
id | pubmed-9449347 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-94493472022-09-08 Transcriptome sequencing reveals differences between leydig cells and sertoli cells of yak Wang, Yaying Pan, Yangyang Wang, Meng Afedo, Seth Yaw Zhao, Ling Han, Xiaohong Liu, Minqing Zhao, Tian Zhang, Tongxiang Ding, Tianyi Wang, Jinglei Cui, Yan Yu, Sijiu Front Vet Sci Veterinary Science In this study, we detected the expression of mRNAs, lncRNAs, and miRNAs in primary cultured leydig cells (LCs) and sertoli cells (SCs) of yak by RNA sequencing technology. A total of 84 differently expression mRNAs (DEmRNAs) (LCs vs. SCs: 15 up and 69 down), 172 differently expression lncRNAs (DElncRNAs) (LCs vs. SCs: 36 up and 136 down), and 90 differently expression miRNAs (DEmiRNAs) (LCs vs. SCs: 72 up and 18 down) were obtained between the two types of cells. GO enrichment and KEGG analysis indicated that the differential expression genes (DEGs) were more enriched in the regulation of actin cytoskeleton, Rap1/MAPK signaling pathway, steroid biosynthesis, focal adhesion, and pathways associated with metabolism. Targeted regulation relationship pairs of 3β-HSD and MSTRG.54630.1, CNTLN and MSTRG.19058.1, BRCA2 and MSTRG.28299.4, CA2 and novel-miR-148, and ceRNA network of LAMC3-MSTRG.68870.1- bta-miR-7862/novel-miR-151/novel-miR-148 were constructed by Cytoscape software. In conclusion, the differences between LCs and SCs were mainly reflected in steroid hormone synthesis, cell proliferation and metabolism, and blood-testicular barrier (BTB) dynamic regulation, and 3β-HSD, CNTLN, BRCA2, CA2, and LAMC3 may be the key factors causing these differences, which may be regulated by ncRNAs. This study provides a basic direction for exploring the differential regulation of LCs and SCs by ncRNAs. Frontiers Media S.A. 2022-08-24 /pmc/articles/PMC9449347/ /pubmed/36090173 http://dx.doi.org/10.3389/fvets.2022.960250 Text en Copyright © 2022 Wang, Pan, Wang, Afedo, Zhao, Han, Liu, Zhao, Zhang, Ding, Wang, Cui and Yu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Veterinary Science Wang, Yaying Pan, Yangyang Wang, Meng Afedo, Seth Yaw Zhao, Ling Han, Xiaohong Liu, Minqing Zhao, Tian Zhang, Tongxiang Ding, Tianyi Wang, Jinglei Cui, Yan Yu, Sijiu Transcriptome sequencing reveals differences between leydig cells and sertoli cells of yak |
title | Transcriptome sequencing reveals differences between leydig cells and sertoli cells of yak |
title_full | Transcriptome sequencing reveals differences between leydig cells and sertoli cells of yak |
title_fullStr | Transcriptome sequencing reveals differences between leydig cells and sertoli cells of yak |
title_full_unstemmed | Transcriptome sequencing reveals differences between leydig cells and sertoli cells of yak |
title_short | Transcriptome sequencing reveals differences between leydig cells and sertoli cells of yak |
title_sort | transcriptome sequencing reveals differences between leydig cells and sertoli cells of yak |
topic | Veterinary Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9449347/ https://www.ncbi.nlm.nih.gov/pubmed/36090173 http://dx.doi.org/10.3389/fvets.2022.960250 |
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