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Attention-optimized DeepLab V3 + for automatic estimation of cucumber disease severity
BACKGROUND: Automatic and accurate estimation of disease severity is critical for disease management and yield loss prediction. Conventional disease severity estimation is performed using images with simple backgrounds, which is limited in practical applications. Thus, there is an urgent need to dev...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9450308/ https://www.ncbi.nlm.nih.gov/pubmed/36068606 http://dx.doi.org/10.1186/s13007-022-00941-8 |
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author | Li, Kaiyu Zhang, Lingxian Li, Bo Li, Shufei Ma, Juncheng |
author_facet | Li, Kaiyu Zhang, Lingxian Li, Bo Li, Shufei Ma, Juncheng |
author_sort | Li, Kaiyu |
collection | PubMed |
description | BACKGROUND: Automatic and accurate estimation of disease severity is critical for disease management and yield loss prediction. Conventional disease severity estimation is performed using images with simple backgrounds, which is limited in practical applications. Thus, there is an urgent need to develop a method for estimating the disease severity of plants based on leaf images captured in field conditions, which is very challenging since the intensity of sunlight is constantly changing, and the image background is complicated. RESULTS: This study developed a simple and accurate image-based disease severity estimation method using an optimized neural network. A hybrid attention and transfer learning optimized semantic segmentation model was proposed to obtain the disease segmentation map. The severity was calculated by the ratio of lesion pixels to leaf pixels. The proposed method was validated using cucumber downy mildew, and powdery mildew leaves collected under natural conditions. The results showed that hybrid attention with the interaction of spatial attention and channel attention can extract fine lesion and leaf features, and transfer learning can further improve the segmentation accuracy of the model. The proposed method can accurately segment healthy leaves and lesions (MIoU = 81.23%, FWIoU = 91.89%). In addition, the severity of cucumber leaf disease was accurately estimated (R(2) = 0.9578, RMSE = 1.1385). Moreover, the proposed model was compared with six different backbones and four semantic segmentation models. The results show that the proposed model outperforms the compared models under complex conditions, and can refine lesion segmentation and accurately estimate the disease severity. CONCLUSIONS: The proposed method was an efficient tool for disease severity estimation in field conditions. This study can facilitate the implementation of artificial intelligence for rapid disease severity estimation and control in agriculture. |
format | Online Article Text |
id | pubmed-9450308 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-94503082022-09-08 Attention-optimized DeepLab V3 + for automatic estimation of cucumber disease severity Li, Kaiyu Zhang, Lingxian Li, Bo Li, Shufei Ma, Juncheng Plant Methods Research BACKGROUND: Automatic and accurate estimation of disease severity is critical for disease management and yield loss prediction. Conventional disease severity estimation is performed using images with simple backgrounds, which is limited in practical applications. Thus, there is an urgent need to develop a method for estimating the disease severity of plants based on leaf images captured in field conditions, which is very challenging since the intensity of sunlight is constantly changing, and the image background is complicated. RESULTS: This study developed a simple and accurate image-based disease severity estimation method using an optimized neural network. A hybrid attention and transfer learning optimized semantic segmentation model was proposed to obtain the disease segmentation map. The severity was calculated by the ratio of lesion pixels to leaf pixels. The proposed method was validated using cucumber downy mildew, and powdery mildew leaves collected under natural conditions. The results showed that hybrid attention with the interaction of spatial attention and channel attention can extract fine lesion and leaf features, and transfer learning can further improve the segmentation accuracy of the model. The proposed method can accurately segment healthy leaves and lesions (MIoU = 81.23%, FWIoU = 91.89%). In addition, the severity of cucumber leaf disease was accurately estimated (R(2) = 0.9578, RMSE = 1.1385). Moreover, the proposed model was compared with six different backbones and four semantic segmentation models. The results show that the proposed model outperforms the compared models under complex conditions, and can refine lesion segmentation and accurately estimate the disease severity. CONCLUSIONS: The proposed method was an efficient tool for disease severity estimation in field conditions. This study can facilitate the implementation of artificial intelligence for rapid disease severity estimation and control in agriculture. BioMed Central 2022-09-06 /pmc/articles/PMC9450308/ /pubmed/36068606 http://dx.doi.org/10.1186/s13007-022-00941-8 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Li, Kaiyu Zhang, Lingxian Li, Bo Li, Shufei Ma, Juncheng Attention-optimized DeepLab V3 + for automatic estimation of cucumber disease severity |
title | Attention-optimized DeepLab V3 + for automatic estimation of cucumber disease severity |
title_full | Attention-optimized DeepLab V3 + for automatic estimation of cucumber disease severity |
title_fullStr | Attention-optimized DeepLab V3 + for automatic estimation of cucumber disease severity |
title_full_unstemmed | Attention-optimized DeepLab V3 + for automatic estimation of cucumber disease severity |
title_short | Attention-optimized DeepLab V3 + for automatic estimation of cucumber disease severity |
title_sort | attention-optimized deeplab v3 + for automatic estimation of cucumber disease severity |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9450308/ https://www.ncbi.nlm.nih.gov/pubmed/36068606 http://dx.doi.org/10.1186/s13007-022-00941-8 |
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