Cargando…

Linear plasmids in Klebsiella and other Enterobacteriaceae

Linear plasmids are extrachromosomal DNA elements that have been found in a small number of bacterial species. To date, the only linear plasmids described in the family Enterobacteriaceae belong to Salmonella , first found in Salmonella enterica Typhi. Here, we describe a collection of 12 isolates o...

Descripción completa

Detalles Bibliográficos
Autores principales:	Hawkey, Jane, Cottingham, Hugh, Tokolyi, Alex, Wick, Ryan R., Judd, Louise M., Cerdeira, Louise, de Oliveira Garcia, Doroti, Wyres, Kelly L., Holt, Kathryn E.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Microbiology Society 2022
Materias:	Bioresources
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9453081/ https://www.ncbi.nlm.nih.gov/pubmed/35416146 http://dx.doi.org/10.1099/mgen.0.000807

Ejemplares similares

Caribbean multi-centre study of Klebsiella pneumoniae: whole-genome sequencing, antimicrobial resistance and virulence factors
por: Heinz, Eva, et al.
Publicado: (2019)

ActinoBase: tools and protocols for researchers working on Streptomyces and other filamentous actinobacteria
por: Feeney, Morgan Anne, et al.
Publicado: (2022)

Identification of Acinetobacter baumannii loci for capsular polysaccharide (KL) and lipooligosaccharide outer core (OCL) synthesis in genome assemblies using curated reference databases compatible with Kaptive
por: Wyres, Kelly L., et al.
Publicado: (2020)

ESBL plasmids in Klebsiella pneumoniae: diversity, transmission and contribution to infection burden in the hospital setting
por: Hawkey, Jane, et al.
Publicado: (2022)

NCTC3000: a century of bacterial strain collecting leads to a rich genomic data resource
por: Dicks, Jo, et al.
Publicado: (2023)

LiSEQ – whole-genome sequencing of a cross-sectional survey of Listeria monocytogenes in ready-to-eat foods and human clinical cases in Europe
por: Painset, Anaïs, et al.
Publicado: (2019)

DiSCo: a sequence-based type-specific predictor of Dsr-dependent dissimilatory sulphur metabolism in microbial data
por: Neukirchen, Sinje, et al.
Publicado: (2021)

Globetrotting strangles: the unbridled national and international transmission of Streptococcus equi between horses
por: Mitchell, Catriona, et al.
Publicado: (2021)

ResFinder – an open online resource for identification of antimicrobial resistance genes in next-generation sequencing data and prediction of phenotypes from genotypes
por: Florensa, Alfred Ferrer, et al.
Publicado: (2022)

Curation of the AMRFinderPlus databases: applications, functionality and impact
por: Feldgarden, Michael, et al.
Publicado: (2022)

TransAAP: an automated annotation pipeline for membrane transporter prediction in bacterial genomes
por: Elbourne, Liam D. H., et al.
Publicado: (2023)

The DataHarmonizer: a tool for faster data harmonization, validation, aggregation and analysis of pathogen genomics contextual information
por: Gill, Ivan S., et al.
Publicado: (2023)

Trycycler: consensus long-read assemblies for bacterial genomes
por: Wick, Ryan R., et al.
Publicado: (2021)

Epidemiology and genomic analysis of Klebsiella oxytoca from a single hospital network in Australia
por: Stewart, James, et al.
Publicado: (2022)

Recovery of small plasmid sequences via Oxford Nanopore sequencing
por: Wick, Ryan R., et al.
Publicado: (2021)

Convergence of virulence and MDR in a single plasmid vector in MDR Klebsiella pneumoniae ST15
por: Lam, Margaret M C, et al.
Publicado: (2019)

Transmission of Klebsiella strains and plasmids within and between grey‐headed flying fox colonies
por: Vezina, Ben, et al.
Publicado: (2022)

Distinct evolutionary dynamics of horizontal gene transfer in drug resistant and virulent clones of Klebsiella pneumoniae
por: Wyres, Kelly L., et al.
Publicado: (2019)

Kaptive 2.0: updated capsule and lipopolysaccharide locus typing for the Klebsiella pneumoniae species complex
por: Lam, Margaret M. C., et al.
Publicado: (2022)

A genomic surveillance framework and genotyping tool for Klebsiella pneumoniae and its related species complex
por: Lam, Margaret M. C., et al.
Publicado: (2021)

Emergence and rapid global dissemination of CTX-M-15-associated Klebsiella pneumoniae strain ST307
por: Wyres, Kelly L, et al.
Publicado: (2019)

Putatively novel serotypes and the potential for reduced vaccine effectiveness: capsular locus diversity revealed among 5405 pneumococcal genomes
por: van Tonder, Andries J., et al.
Publicado: (2016)

Use of whole genome sequencing in surveillance for antimicrobial-resistant Shigella sonnei infections acquired from domestic and international sources
por: Abelman, Rebecca L., et al.
Publicado: (2019)

Dynamic linkage of COVID-19 test results between Public Health England’s Second Generation Surveillance System and UK Biobank
por: Armstrong, Jacob, et al.
Publicado: (2020)

Visualizing variation within Global Pneumococcal Sequence Clusters (GPSCs) and country population snapshots to contextualize pneumococcal isolates
por: Gladstone, Rebecca A., et al.
Publicado: (2020)

A comprehensive and high-quality collection of Escherichia coli genomes and their genes
por: Horesh, Gal, et al.
Publicado: (2021)

Complete microbial genomes for public health in Australia and the Southwest Pacific
por: Baines, Sarah L., et al.
Publicado: (2020)

ActDES – a curated Actinobacterial Database for Evolutionary Studies
por: Schniete, Jana K., et al.
Publicado: (2021)

Nanopore-only assemblies for genomic surveillance of the global priority drug-resistant pathogen, Klebsiella pneumoniae
por: Foster-Nyarko, Ebenezer, et al.
Publicado: (2023)

A curated collection of Klebsiella metabolic models reveals variable substrate usage and gene essentiality
por: Hawkey, Jane, et al.
Publicado: (2022)

Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae
por: Lam, Margaret M. C., et al.
Publicado: (2018)

Corrigendum: ‘Nanopore-only assemblies for genomic surveillance of the global priority drug-resistant pathogen, Klebsiella pneumoniae’
por: Foster-Nyarko, Ebenezer, et al.
Publicado: (2023)

Comment on: CG258 Klebsiella pneumoniae isolates without β-lactam resistance at the onset of the carbapenem-resistant Enterobacteriaceae epidemic in New York City
por: Wyres, Kelly L, et al.
Publicado: (2019)

Genetic diversity, mobilisation and spread of the yersiniabactin-encoding mobile element ICEKp in Klebsiella pneumoniae populations
por: Lam, Margaret M. C., et al.
Publicado: (2018)

Kaptive Web: User-Friendly Capsule and Lipopolysaccharide Serotype Prediction for Klebsiella Genomes
por: Wick, Ryan R., et al.
Publicado: (2018)

Z/I1 Hybrid Virulence Plasmids Carrying Antimicrobial Resistance genes in S. Typhimurium from Australian Food Animal Production
por: Wyrsch, Ethan R., et al.
Publicado: (2019)

Identification of Klebsiella capsule synthesis loci from whole genome data
por: Wyres, Kelly L., et al.
Publicado: (2016)

Detection of plasmid contigs in draft genome assemblies using customized Kraken databases
por: Gomi, Ryota, et al.
Publicado: (2021)

Bactabolize is a tool for high-throughput generation of bacterial strain-specific metabolic models
por: Vezina, Ben, et al.
Publicado: (2023)

Population genomics of hypervirulent Klebsiella pneumoniae clonal-group 23 reveals early emergence and rapid global dissemination
por: Lam, Margaret M. C., et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_fid3t4435ukeg69v1nrhvsuung