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A more effective CT synthesizer using transformers for cone-beam CT-guided adaptive radiotherapy
PURPOSE: The challenge of cone-beam computed tomography (CBCT) is its low image quality, which limits its application for adaptive radiotherapy (ART). Despite recent substantial improvement in CBCT imaging using the deep learning method, the image quality still needs to be improved for effective ART...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9454309/ https://www.ncbi.nlm.nih.gov/pubmed/36091131 http://dx.doi.org/10.3389/fonc.2022.988800 |
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author | Chen, Xinyuan Liu, Yuxiang Yang, Bining Zhu, Ji Yuan, Siqi Xie, Xuejie Liu, Yueping Dai, Jianrong Men, Kuo |
author_facet | Chen, Xinyuan Liu, Yuxiang Yang, Bining Zhu, Ji Yuan, Siqi Xie, Xuejie Liu, Yueping Dai, Jianrong Men, Kuo |
author_sort | Chen, Xinyuan |
collection | PubMed |
description | PURPOSE: The challenge of cone-beam computed tomography (CBCT) is its low image quality, which limits its application for adaptive radiotherapy (ART). Despite recent substantial improvement in CBCT imaging using the deep learning method, the image quality still needs to be improved for effective ART application. Spurred by the advantages of transformers, which employs multi-head attention mechanisms to capture long-range contextual relations between image pixels, we proposed a novel transformer-based network (called TransCBCT) to generate synthetic CT (sCT) from CBCT. This study aimed to further improve the accuracy and efficiency of ART. MATERIALS AND METHODS: In this study, 91 patients diagnosed with prostate cancer were enrolled. We constructed a transformer-based hierarchical encoder–decoder structure with skip connection, called TransCBCT. The network also employed several convolutional layers to capture local context. The proposed TransCBCT was trained and validated on 6,144 paired CBCT/deformed CT images from 76 patients and tested on 1,026 paired images from 15 patients. The performance of the proposed TransCBCT was compared with a widely recognized style transferring deep learning method, the cycle-consistent adversarial network (CycleGAN). We evaluated the image quality and clinical value (application in auto-segmentation and dose calculation) for ART need. RESULTS: TransCBCT had superior performance in generating sCT from CBCT. The mean absolute error of TransCBCT was 28.8 ± 16.7 HU, compared to 66.5 ± 13.2 for raw CBCT, and 34.3 ± 17.3 for CycleGAN. It can preserve the structure of raw CBCT and reduce artifacts. When applied in auto-segmentation, the Dice similarity coefficients of bladder and rectum between auto-segmentation and oncologist manual contours were 0.92 and 0.84 for TransCBCT, respectively, compared to 0.90 and 0.83 for CycleGAN. When applied in dose calculation, the gamma passing rate (1%/1 mm criterion) was 97.5% ± 1.1% for TransCBCT, compared to 96.9% ± 1.8% for CycleGAN. CONCLUSIONS: The proposed TransCBCT can effectively generate sCT for CBCT. It has the potential to improve radiotherapy accuracy. |
format | Online Article Text |
id | pubmed-9454309 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-94543092022-09-09 A more effective CT synthesizer using transformers for cone-beam CT-guided adaptive radiotherapy Chen, Xinyuan Liu, Yuxiang Yang, Bining Zhu, Ji Yuan, Siqi Xie, Xuejie Liu, Yueping Dai, Jianrong Men, Kuo Front Oncol Oncology PURPOSE: The challenge of cone-beam computed tomography (CBCT) is its low image quality, which limits its application for adaptive radiotherapy (ART). Despite recent substantial improvement in CBCT imaging using the deep learning method, the image quality still needs to be improved for effective ART application. Spurred by the advantages of transformers, which employs multi-head attention mechanisms to capture long-range contextual relations between image pixels, we proposed a novel transformer-based network (called TransCBCT) to generate synthetic CT (sCT) from CBCT. This study aimed to further improve the accuracy and efficiency of ART. MATERIALS AND METHODS: In this study, 91 patients diagnosed with prostate cancer were enrolled. We constructed a transformer-based hierarchical encoder–decoder structure with skip connection, called TransCBCT. The network also employed several convolutional layers to capture local context. The proposed TransCBCT was trained and validated on 6,144 paired CBCT/deformed CT images from 76 patients and tested on 1,026 paired images from 15 patients. The performance of the proposed TransCBCT was compared with a widely recognized style transferring deep learning method, the cycle-consistent adversarial network (CycleGAN). We evaluated the image quality and clinical value (application in auto-segmentation and dose calculation) for ART need. RESULTS: TransCBCT had superior performance in generating sCT from CBCT. The mean absolute error of TransCBCT was 28.8 ± 16.7 HU, compared to 66.5 ± 13.2 for raw CBCT, and 34.3 ± 17.3 for CycleGAN. It can preserve the structure of raw CBCT and reduce artifacts. When applied in auto-segmentation, the Dice similarity coefficients of bladder and rectum between auto-segmentation and oncologist manual contours were 0.92 and 0.84 for TransCBCT, respectively, compared to 0.90 and 0.83 for CycleGAN. When applied in dose calculation, the gamma passing rate (1%/1 mm criterion) was 97.5% ± 1.1% for TransCBCT, compared to 96.9% ± 1.8% for CycleGAN. CONCLUSIONS: The proposed TransCBCT can effectively generate sCT for CBCT. It has the potential to improve radiotherapy accuracy. Frontiers Media S.A. 2022-08-25 /pmc/articles/PMC9454309/ /pubmed/36091131 http://dx.doi.org/10.3389/fonc.2022.988800 Text en Copyright © 2022 Chen, Liu, Yang, Zhu, Yuan, Xie, Liu, Dai and Men https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Chen, Xinyuan Liu, Yuxiang Yang, Bining Zhu, Ji Yuan, Siqi Xie, Xuejie Liu, Yueping Dai, Jianrong Men, Kuo A more effective CT synthesizer using transformers for cone-beam CT-guided adaptive radiotherapy |
title | A more effective CT synthesizer using transformers for cone-beam CT-guided adaptive radiotherapy |
title_full | A more effective CT synthesizer using transformers for cone-beam CT-guided adaptive radiotherapy |
title_fullStr | A more effective CT synthesizer using transformers for cone-beam CT-guided adaptive radiotherapy |
title_full_unstemmed | A more effective CT synthesizer using transformers for cone-beam CT-guided adaptive radiotherapy |
title_short | A more effective CT synthesizer using transformers for cone-beam CT-guided adaptive radiotherapy |
title_sort | more effective ct synthesizer using transformers for cone-beam ct-guided adaptive radiotherapy |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9454309/ https://www.ncbi.nlm.nih.gov/pubmed/36091131 http://dx.doi.org/10.3389/fonc.2022.988800 |
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