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Small Nucleolar RNAs in Pseudoexfoliation Glaucoma

Small nucleolar RNAs (snoRNAs) are small non-coding regulatory RNAs that have been investigated extensively in recent years. However, the relationship between snoRNA and glaucoma is still unknown. This study aims to analyze the levels of snoRNA expression in the aqueous humor (AH) of patients with p...

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Autores principales: Gasińska, Karolina, Czop, Marcin, Kosior-Jarecka, Ewa, Wróbel-Dudzińska, Dominika, Kocki, Janusz, Żarnowski, Tomasz
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9454646/
https://www.ncbi.nlm.nih.gov/pubmed/36078146
http://dx.doi.org/10.3390/cells11172738
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author Gasińska, Karolina
Czop, Marcin
Kosior-Jarecka, Ewa
Wróbel-Dudzińska, Dominika
Kocki, Janusz
Żarnowski, Tomasz
author_facet Gasińska, Karolina
Czop, Marcin
Kosior-Jarecka, Ewa
Wróbel-Dudzińska, Dominika
Kocki, Janusz
Żarnowski, Tomasz
author_sort Gasińska, Karolina
collection PubMed
description Small nucleolar RNAs (snoRNAs) are small non-coding regulatory RNAs that have been investigated extensively in recent years. However, the relationship between snoRNA and glaucoma is still unknown. This study aims to analyze the levels of snoRNA expression in the aqueous humor (AH) of patients with pseudoexfoliation glaucoma (PEXG) compared to a control group and identify hypothetical snoRNA-dependent mechanisms contributing to PEXG. The AH was obtained from eighteen Caucasian patients, comprising nine PEXG and nine age-matched control patients. RNA was isolated, and a microarray system was used to determine the snoRNA expression profiles. Functional and enrichment analyses were performed. We identified seven snoRNAs, SNORD73B, SNORD58A, SNORD56, SNORA77, SNORA72, SNORA64, and SNORA32, in the AH of the PEXG and control group patients. Five snoRNAs showed statistically significantly lower expression in the PEXG group, and two snoRNAs had statistically significantly higher expression in the PEXG group compared to the control group. In addition, we identified two factors—CACNB3 for SNORA64 and TMEM63C for SNORA32, similar to PEX-related genes (CACNA1A and TMEM136). The enrichment analysis for four genes targeted by snoRNAs revealed possible mechanisms associated with glaucoma and/or PEX, but the direct role of snoRNAs in these biological processes was not proven.
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spelling pubmed-94546462022-09-09 Small Nucleolar RNAs in Pseudoexfoliation Glaucoma Gasińska, Karolina Czop, Marcin Kosior-Jarecka, Ewa Wróbel-Dudzińska, Dominika Kocki, Janusz Żarnowski, Tomasz Cells Article Small nucleolar RNAs (snoRNAs) are small non-coding regulatory RNAs that have been investigated extensively in recent years. However, the relationship between snoRNA and glaucoma is still unknown. This study aims to analyze the levels of snoRNA expression in the aqueous humor (AH) of patients with pseudoexfoliation glaucoma (PEXG) compared to a control group and identify hypothetical snoRNA-dependent mechanisms contributing to PEXG. The AH was obtained from eighteen Caucasian patients, comprising nine PEXG and nine age-matched control patients. RNA was isolated, and a microarray system was used to determine the snoRNA expression profiles. Functional and enrichment analyses were performed. We identified seven snoRNAs, SNORD73B, SNORD58A, SNORD56, SNORA77, SNORA72, SNORA64, and SNORA32, in the AH of the PEXG and control group patients. Five snoRNAs showed statistically significantly lower expression in the PEXG group, and two snoRNAs had statistically significantly higher expression in the PEXG group compared to the control group. In addition, we identified two factors—CACNB3 for SNORA64 and TMEM63C for SNORA32, similar to PEX-related genes (CACNA1A and TMEM136). The enrichment analysis for four genes targeted by snoRNAs revealed possible mechanisms associated with glaucoma and/or PEX, but the direct role of snoRNAs in these biological processes was not proven. MDPI 2022-09-02 /pmc/articles/PMC9454646/ /pubmed/36078146 http://dx.doi.org/10.3390/cells11172738 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Gasińska, Karolina
Czop, Marcin
Kosior-Jarecka, Ewa
Wróbel-Dudzińska, Dominika
Kocki, Janusz
Żarnowski, Tomasz
Small Nucleolar RNAs in Pseudoexfoliation Glaucoma
title Small Nucleolar RNAs in Pseudoexfoliation Glaucoma
title_full Small Nucleolar RNAs in Pseudoexfoliation Glaucoma
title_fullStr Small Nucleolar RNAs in Pseudoexfoliation Glaucoma
title_full_unstemmed Small Nucleolar RNAs in Pseudoexfoliation Glaucoma
title_short Small Nucleolar RNAs in Pseudoexfoliation Glaucoma
title_sort small nucleolar rnas in pseudoexfoliation glaucoma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9454646/
https://www.ncbi.nlm.nih.gov/pubmed/36078146
http://dx.doi.org/10.3390/cells11172738
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