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CafeteriaFCD Corpus: Food Consumption Data Annotated with Regard to Different Food Semantic Resources
Besides the numerous studies in the last decade involving food and nutrition data, this domain remains low resourced. Annotated corpuses are very useful tools for researchers and experts of the domain in question, as well as for data scientists for analysis. In this paper, we present the annotation...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9455825/ https://www.ncbi.nlm.nih.gov/pubmed/36076868 http://dx.doi.org/10.3390/foods11172684 |
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author | Ispirova, Gordana Cenikj, Gjorgjina Ogrinc, Matevž Valenčič, Eva Stojanov, Riste Korošec, Peter Cavalli, Ermanno Koroušić Seljak, Barbara Eftimov, Tome |
author_facet | Ispirova, Gordana Cenikj, Gjorgjina Ogrinc, Matevž Valenčič, Eva Stojanov, Riste Korošec, Peter Cavalli, Ermanno Koroušić Seljak, Barbara Eftimov, Tome |
author_sort | Ispirova, Gordana |
collection | PubMed |
description | Besides the numerous studies in the last decade involving food and nutrition data, this domain remains low resourced. Annotated corpuses are very useful tools for researchers and experts of the domain in question, as well as for data scientists for analysis. In this paper, we present the annotation process of food consumption data (recipes) with semantic tags from different semantic resources—Hansard taxonomy, FoodOn ontology, SNOMED CT terminology and the FoodEx2 classification system. FoodBase is an annotated corpus of food entities—recipes—which includes a curated version of 1000 instances, considered a gold standard. In this study, we use the curated version of FoodBase and two different approaches for annotating—the NCBO annotator (for the FoodOn and SNOMED CT annotations) and the semi-automatic StandFood method (for the FoodEx2 annotations). The end result is a new version of the golden standard of the FoodBase corpus, called the CafeteriaFCD (Cafeteria Food Consumption Data) corpus. This corpus contains food consumption data—recipes—annotated with semantic tags from the aforementioned four different external semantic resources. With these annotations, data interoperability is achieved between five semantic resources from different domains. This resource can be further utilized for developing and training different information extraction pipelines using state-of-the-art NLP approaches for tracing knowledge about food safety applications. |
format | Online Article Text |
id | pubmed-9455825 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-94558252022-09-09 CafeteriaFCD Corpus: Food Consumption Data Annotated with Regard to Different Food Semantic Resources Ispirova, Gordana Cenikj, Gjorgjina Ogrinc, Matevž Valenčič, Eva Stojanov, Riste Korošec, Peter Cavalli, Ermanno Koroušić Seljak, Barbara Eftimov, Tome Foods Article Besides the numerous studies in the last decade involving food and nutrition data, this domain remains low resourced. Annotated corpuses are very useful tools for researchers and experts of the domain in question, as well as for data scientists for analysis. In this paper, we present the annotation process of food consumption data (recipes) with semantic tags from different semantic resources—Hansard taxonomy, FoodOn ontology, SNOMED CT terminology and the FoodEx2 classification system. FoodBase is an annotated corpus of food entities—recipes—which includes a curated version of 1000 instances, considered a gold standard. In this study, we use the curated version of FoodBase and two different approaches for annotating—the NCBO annotator (for the FoodOn and SNOMED CT annotations) and the semi-automatic StandFood method (for the FoodEx2 annotations). The end result is a new version of the golden standard of the FoodBase corpus, called the CafeteriaFCD (Cafeteria Food Consumption Data) corpus. This corpus contains food consumption data—recipes—annotated with semantic tags from the aforementioned four different external semantic resources. With these annotations, data interoperability is achieved between five semantic resources from different domains. This resource can be further utilized for developing and training different information extraction pipelines using state-of-the-art NLP approaches for tracing knowledge about food safety applications. MDPI 2022-09-02 /pmc/articles/PMC9455825/ /pubmed/36076868 http://dx.doi.org/10.3390/foods11172684 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Ispirova, Gordana Cenikj, Gjorgjina Ogrinc, Matevž Valenčič, Eva Stojanov, Riste Korošec, Peter Cavalli, Ermanno Koroušić Seljak, Barbara Eftimov, Tome CafeteriaFCD Corpus: Food Consumption Data Annotated with Regard to Different Food Semantic Resources |
title | CafeteriaFCD Corpus: Food Consumption Data Annotated with Regard to Different Food Semantic Resources |
title_full | CafeteriaFCD Corpus: Food Consumption Data Annotated with Regard to Different Food Semantic Resources |
title_fullStr | CafeteriaFCD Corpus: Food Consumption Data Annotated with Regard to Different Food Semantic Resources |
title_full_unstemmed | CafeteriaFCD Corpus: Food Consumption Data Annotated with Regard to Different Food Semantic Resources |
title_short | CafeteriaFCD Corpus: Food Consumption Data Annotated with Regard to Different Food Semantic Resources |
title_sort | cafeteriafcd corpus: food consumption data annotated with regard to different food semantic resources |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9455825/ https://www.ncbi.nlm.nih.gov/pubmed/36076868 http://dx.doi.org/10.3390/foods11172684 |
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