Cargando…

Deciphering the Regulatory Circuits of RA3 Replication Module - Mechanisms of the Copy Number Control

The RA3 plasmid, the archetype of IncU incompatibility group, represents a mosaic-modular genome of 45.9 kb. The replication module encompasses repA and repB (initiator) surrounded by two long repetitive sequences DR1 and DR2 of unknown function. Here, we mapped the origin of replication oriV to the...

Descripción completa

Detalles Bibliográficos
Autores principales:	Markowska-Barkic, Aleksandra, Lewicka, Ewa, Czeredys, Magdalena, Mitura, Monika, Jagura-Burdzy, Grazyna
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2022
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9455977/ https://www.ncbi.nlm.nih.gov/pubmed/36077372 http://dx.doi.org/10.3390/ijms23179964

Ejemplares similares

Alpha-Helical Protein KfrC Acts as a Switch between the Lateral and Vertical Modes of Dissemination of Broad-Host-Range RA3 Plasmid from IncU (IncP-6) Incompatibility Group
por: Mitura, Monika, et al.
Publicado: (2021)

Unique Properties of the Alpha-Helical DNA-Binding Protein KfrA Encoded by the IncU Incompatibility Group Plasmid RA3 and Its Host-Dependent Role in Plasmid Maintenance
por: Lewicka, Ewa, et al.
Publicado: (2021)

Transcriptional Organization of the Stability Module of Broad-Host-Range Plasmid RA3, from the IncU Group
por: Lewicka, Ewa, et al.
Publicado: (2020)

Convenient broad-host-range unstable vectors for studying stabilization cassettes in diverse bacteria
por: Bartosik, Aneta A., et al.
Publicado: (2016)

MobC of conjugative RA3 plasmid from IncU group autoregulates the expression of bicistronic mobC-nic operon and stimulates conjugative transfer
por: Godziszewska, Jolanta, et al.
Publicado: (2014)

Pseudomonas aeruginosa partitioning protein ParB acts as a nucleoid-associated protein binding to multiple copies of a parS-related motif
por: Kawalek, Adam, et al.
Publicado: (2018)

Robust ParB Binding to Half-parS Sites in Pseudomonas aeruginosa—A Mechanism for Retaining ParB on the Nucleoid?
por: Kawalek, Adam, et al.
Publicado: (2023)

Correction: A Single parS Sequence from the Cluster of Four Sites Closest to oriC Is Necessary and Sufficient for Proper Chromosome Segregation in Pseudomonas aeruginosa
por: Jecz, Paulina, et al.
Publicado: (2016)

A Single parS Sequence from the Cluster of Four Sites Closest to oriC Is Necessary and Sufficient for Proper Chromosome Segregation in Pseudomonas aeruginosa
por: Jecz, Paulina, et al.
Publicado: (2015)

Rules and Exceptions: The Role of Chromosomal ParB in DNA Segregation and Other Cellular Processes
por: Kawalek, Adam, et al.
Publicado: (2020)

Genome sequence of Pseudomonas aeruginosa PAO1161, a PAO1 derivative with the ICEPae1161 integrative and conjugative element
por: Kawalek, Adam, et al.
Publicado: (2020)

Deciphering the chronology of copy number alterations in Multiple Myeloma
por: Aktas Samur, Anil, et al.
Publicado: (2019)

Individual Nudix hydrolases affect diverse features of Pseudomonas aeruginosa
por: Drabinska, Joanna, et al.
Publicado: (2020)

Increased ParB level affects expression of stress response, adaptation and virulence operons and potentiates repression of promoters adjacent to the high affinity binding sites parS3 and parS4 in Pseudomonas aeruginosa
por: Kawalek, Adam, et al.
Publicado: (2017)

Systematic analysis of enhancer regulatory circuit perturbation driven by copy number variations in malignant glioma
por: Xiao, Jun, et al.
Publicado: (2021)

Diverse Partners of the Partitioning ParB Protein in Pseudomonas aeruginosa
por: Kawalek, Adam, et al.
Publicado: (2023)

Transcriptional Profiling of ParA and ParB Mutants in Actively Dividing Cells of an Opportunistic Human Pathogen Pseudomonas aeruginosa
por: Bartosik, Aneta A., et al.
Publicado: (2014)

DECIPHER: database for the interpretation of phenotype-linked plausibly pathogenic sequence and copy-number variation
por: Bragin, Eugene, et al.
Publicado: (2014)

Revealing biophysical properties of KfrA-type proteins as a novel class of cytoskeletal, coiled-coil plasmid-encoded proteins
por: Adamczyk, M., et al.
Publicado: (2021)

CONET: copy number event tree model of evolutionary tumor history for single-cell data
por: Markowska, Magda, et al.
Publicado: (2022)

NeuroArray, A Custom CGH Microarray to Decipher Copy Number Variants in Alzheimer’s Disease
por: Cuccaro, Denis, et al.
Publicado: (2018)

DNA replication stress restricts ribosomal DNA copy number
por: Salim, Devika, et al.
Publicado: (2017)

ParB deficiency in Pseudomonas aeruginosa destabilizes the partner protein ParA and affects a variety of physiological parameters
por: Bartosik, A. A., et al.
Publicado: (2009)

Dissection of the region of Pseudomonas aeruginosa ParA that is important for dimerization and interactions with its partner ParB
por: Bartosik, Aneta A., et al.
Publicado: (2014)

Dysregulation of Neuronal Calcium Signaling via Store-Operated Channels in Huntington's Disease
por: Czeredys, Magdalena
Publicado: (2020)

Enhancer Chip: Detecting Human Copy Number Variations in Regulatory Elements
por: Savarese, Marco, et al.
Publicado: (2012)

Diversity and regulatory impact of copy number variation in the primate Macaca fascicularis
por: Gschwind, Andreas R., et al.
Publicado: (2017)

Deciphering the Correlation between Breast Tumor Samples and Cell Lines by Integrating Copy Number Changes and Gene Expression Profiles
por: Sun, Yi, et al.
Publicado: (2015)

Single-cell sequencing deciphers a convergent evolution of copy number alterations from primary to circulating tumor cells
por: Gao, Yan, et al.
Publicado: (2017)

Identification of C-terminal hydrophobic residues important for dimerization and all known functions of ParB of Pseudomonas aeruginosa
por: Mierzejewska, J., et al.
Publicado: (2012)

Rif1 inhibits replication fork progression and controls DNA copy number in Drosophila
por: Munden, Alexander, et al.
Publicado: (2018)

Integrative Analysis of Transcriptional Regulatory Network and Copy Number Variation in Intrahepatic Cholangiocarcinoma
por: Li, Ling, et al.
Publicado: (2014)

Replication timing networks reveal a link between transcription regulatory circuits and replication timing control
por: Rivera-Mulia, Juan Carlos, et al.
Publicado: (2019)

Molecular Components of Store-Operated Calcium Channels in the Regulation of Neural Stem Cell Physiology, Neurogenesis, and the Pathology of Huntington’s Disease
por: Latoszek, Ewelina, et al.
Publicado: (2021)

Copy-number-variation and copy-number-alteration region detection by cumulative plots
por: Li, Wentian, et al.
Publicado: (2009)

Interactive analysis of large cancer copy number studies with Copy Number Explorer
por: Newman, Scott
Publicado: (2015)

Deciphering neural circuits mediating sound-induced analgesia
por: Zhou, Wenjie, et al.
Publicado: (2023)

A Microhomology-Mediated Break-Induced Replication Model for the Origin of Human Copy Number Variation
por: Hastings, P. J., et al.
Publicado: (2009)

Developmental and Pathological Changes in the Human Cardiac Muscle Mitochondrial DNA Organization, Replication and Copy Number
por: Pohjoismäki, Jaakko L. O., et al.
Publicado: (2010)

Genome-wide copy number profiling of single cells in S-phase reveals DNA-replication domains
por: Van der Aa, Niels, et al.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_8hmrqh5t5nnm384jgjo7lc9sfu