Cargando…
Phylogenetic and Expression Analysis of Fos Transcription Factors in Zebrafish
Members of the FOS protein family regulate gene expression responses to a multitude of extracellular signals and are dysregulated in several pathological states. Whilst mouse genetic models have provided key insights into the tissue-specific functions of these proteins in vivo, little is known about...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9456341/ https://www.ncbi.nlm.nih.gov/pubmed/36077499 http://dx.doi.org/10.3390/ijms231710098 |
_version_ | 1784785792238878720 |
---|---|
author | Kubra, Khadizatul Gaddu, Gurveer K. Liongue, Clifford Heidary, Somayyeh Ward, Alister C. Dhillon, Amardeep S. Basheer, Faiza |
author_facet | Kubra, Khadizatul Gaddu, Gurveer K. Liongue, Clifford Heidary, Somayyeh Ward, Alister C. Dhillon, Amardeep S. Basheer, Faiza |
author_sort | Kubra, Khadizatul |
collection | PubMed |
description | Members of the FOS protein family regulate gene expression responses to a multitude of extracellular signals and are dysregulated in several pathological states. Whilst mouse genetic models have provided key insights into the tissue-specific functions of these proteins in vivo, little is known about their roles during early vertebrate embryonic development. This study examined the potential of using zebrafish as a model for such studies and, more broadly, for investigating the mechanisms regulating the functions of Fos proteins in vivo. Through phylogenetic and sequence analysis, we identified six zebrafish FOS orthologues, fosaa, fosab, fosb, fosl1a, fosl1b, and fosl2, which show high conservation in key regulatory domains and post-translational modification sites compared to their equivalent human proteins. During embryogenesis, zebrafish fos genes exhibit both overlapping and distinct spatiotemporal patterns of expression in specific cell types and tissues. Most fos genes are also expressed in a variety of adult zebrafish tissues. As in humans, we also found that expression of zebrafish FOS orthologs is induced by oncogenic BRAF-ERK signalling in zebrafish melanomas. These findings suggest that zebrafish represent an alternate model to mice for investigating the regulation and functions of Fos proteins in vertebrate embryonic and adult tissues, and cancer. |
format | Online Article Text |
id | pubmed-9456341 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-94563412022-09-09 Phylogenetic and Expression Analysis of Fos Transcription Factors in Zebrafish Kubra, Khadizatul Gaddu, Gurveer K. Liongue, Clifford Heidary, Somayyeh Ward, Alister C. Dhillon, Amardeep S. Basheer, Faiza Int J Mol Sci Article Members of the FOS protein family regulate gene expression responses to a multitude of extracellular signals and are dysregulated in several pathological states. Whilst mouse genetic models have provided key insights into the tissue-specific functions of these proteins in vivo, little is known about their roles during early vertebrate embryonic development. This study examined the potential of using zebrafish as a model for such studies and, more broadly, for investigating the mechanisms regulating the functions of Fos proteins in vivo. Through phylogenetic and sequence analysis, we identified six zebrafish FOS orthologues, fosaa, fosab, fosb, fosl1a, fosl1b, and fosl2, which show high conservation in key regulatory domains and post-translational modification sites compared to their equivalent human proteins. During embryogenesis, zebrafish fos genes exhibit both overlapping and distinct spatiotemporal patterns of expression in specific cell types and tissues. Most fos genes are also expressed in a variety of adult zebrafish tissues. As in humans, we also found that expression of zebrafish FOS orthologs is induced by oncogenic BRAF-ERK signalling in zebrafish melanomas. These findings suggest that zebrafish represent an alternate model to mice for investigating the regulation and functions of Fos proteins in vertebrate embryonic and adult tissues, and cancer. MDPI 2022-09-03 /pmc/articles/PMC9456341/ /pubmed/36077499 http://dx.doi.org/10.3390/ijms231710098 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Kubra, Khadizatul Gaddu, Gurveer K. Liongue, Clifford Heidary, Somayyeh Ward, Alister C. Dhillon, Amardeep S. Basheer, Faiza Phylogenetic and Expression Analysis of Fos Transcription Factors in Zebrafish |
title | Phylogenetic and Expression Analysis of Fos Transcription Factors in Zebrafish |
title_full | Phylogenetic and Expression Analysis of Fos Transcription Factors in Zebrafish |
title_fullStr | Phylogenetic and Expression Analysis of Fos Transcription Factors in Zebrafish |
title_full_unstemmed | Phylogenetic and Expression Analysis of Fos Transcription Factors in Zebrafish |
title_short | Phylogenetic and Expression Analysis of Fos Transcription Factors in Zebrafish |
title_sort | phylogenetic and expression analysis of fos transcription factors in zebrafish |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9456341/ https://www.ncbi.nlm.nih.gov/pubmed/36077499 http://dx.doi.org/10.3390/ijms231710098 |
work_keys_str_mv | AT kubrakhadizatul phylogeneticandexpressionanalysisoffostranscriptionfactorsinzebrafish AT gaddugurveerk phylogeneticandexpressionanalysisoffostranscriptionfactorsinzebrafish AT liongueclifford phylogeneticandexpressionanalysisoffostranscriptionfactorsinzebrafish AT heidarysomayyeh phylogeneticandexpressionanalysisoffostranscriptionfactorsinzebrafish AT wardalisterc phylogeneticandexpressionanalysisoffostranscriptionfactorsinzebrafish AT dhillonamardeeps phylogeneticandexpressionanalysisoffostranscriptionfactorsinzebrafish AT basheerfaiza phylogeneticandexpressionanalysisoffostranscriptionfactorsinzebrafish |