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Development of GBRT Model as a Novel and Robust Mathematical Model to Predict and Optimize the Solubility of Decitabine as an Anti-Cancer Drug

The efficient production of solid-dosage oral formulations using eco-friendly supercritical solvents is known as a breakthrough technology towards developing cost-effective therapeutic drugs. Drug solubility is a significant parameter which must be measured before designing the process. Decitabine b...

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Autores principales: Abdelbasset, Walid Kamal, Elsayed, Shereen H., Alshehri, Sameer, Huwaimel, Bader, Alobaida, Ahmed, Alsubaiyel, Amal M., Alqahtani, Abdulsalam A., El Hamd, Mohamed A., Venkatesan, Kumar, AboRas, Kareem M., Abourehab, Mohammed A. S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9457620/
https://www.ncbi.nlm.nih.gov/pubmed/36080444
http://dx.doi.org/10.3390/molecules27175676
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author Abdelbasset, Walid Kamal
Elsayed, Shereen H.
Alshehri, Sameer
Huwaimel, Bader
Alobaida, Ahmed
Alsubaiyel, Amal M.
Alqahtani, Abdulsalam A.
El Hamd, Mohamed A.
Venkatesan, Kumar
AboRas, Kareem M.
Abourehab, Mohammed A. S.
author_facet Abdelbasset, Walid Kamal
Elsayed, Shereen H.
Alshehri, Sameer
Huwaimel, Bader
Alobaida, Ahmed
Alsubaiyel, Amal M.
Alqahtani, Abdulsalam A.
El Hamd, Mohamed A.
Venkatesan, Kumar
AboRas, Kareem M.
Abourehab, Mohammed A. S.
author_sort Abdelbasset, Walid Kamal
collection PubMed
description The efficient production of solid-dosage oral formulations using eco-friendly supercritical solvents is known as a breakthrough technology towards developing cost-effective therapeutic drugs. Drug solubility is a significant parameter which must be measured before designing the process. Decitabine belongs to the antimetabolite class of chemotherapy agents applied for the treatment of patients with myelodysplastic syndrome (MDS). In recent years, the prediction of drug solubility by applying mathematical models through artificial intelligence (AI) has become known as an interesting topic due to the high cost of experimental investigations. The purpose of this study is to develop various machine-learning-based models to estimate the optimum solubility of the anti-cancer drug decitabine, to evaluate the effects of pressure and temperature on it. To make models on a small dataset in this research, we used three ensemble methods, Random Forest (RFR), Extra Tree (ETR), and Gradient Boosted Regression Trees (GBRT). Different configurations were tested, and optimal hyper-parameters were found. Then, the final models were assessed using standard metrics. RFR, ETR, and GBRT had R2 scores of 0.925, 0.999, and 0.999, respectively. Furthermore, the MAPE metric error rates were 1.423 × 10(−1) 7.573 × 10(−2), and 7.119 × 10(−2), respectively. According to these facts, GBRT was considered as the primary model in this paper. Using this method, the optimal amounts are calculated as: P = 380.88 bar, T = 333.01 K, Y = 0.001073.
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spelling pubmed-94576202022-09-09 Development of GBRT Model as a Novel and Robust Mathematical Model to Predict and Optimize the Solubility of Decitabine as an Anti-Cancer Drug Abdelbasset, Walid Kamal Elsayed, Shereen H. Alshehri, Sameer Huwaimel, Bader Alobaida, Ahmed Alsubaiyel, Amal M. Alqahtani, Abdulsalam A. El Hamd, Mohamed A. Venkatesan, Kumar AboRas, Kareem M. Abourehab, Mohammed A. S. Molecules Article The efficient production of solid-dosage oral formulations using eco-friendly supercritical solvents is known as a breakthrough technology towards developing cost-effective therapeutic drugs. Drug solubility is a significant parameter which must be measured before designing the process. Decitabine belongs to the antimetabolite class of chemotherapy agents applied for the treatment of patients with myelodysplastic syndrome (MDS). In recent years, the prediction of drug solubility by applying mathematical models through artificial intelligence (AI) has become known as an interesting topic due to the high cost of experimental investigations. The purpose of this study is to develop various machine-learning-based models to estimate the optimum solubility of the anti-cancer drug decitabine, to evaluate the effects of pressure and temperature on it. To make models on a small dataset in this research, we used three ensemble methods, Random Forest (RFR), Extra Tree (ETR), and Gradient Boosted Regression Trees (GBRT). Different configurations were tested, and optimal hyper-parameters were found. Then, the final models were assessed using standard metrics. RFR, ETR, and GBRT had R2 scores of 0.925, 0.999, and 0.999, respectively. Furthermore, the MAPE metric error rates were 1.423 × 10(−1) 7.573 × 10(−2), and 7.119 × 10(−2), respectively. According to these facts, GBRT was considered as the primary model in this paper. Using this method, the optimal amounts are calculated as: P = 380.88 bar, T = 333.01 K, Y = 0.001073. MDPI 2022-09-02 /pmc/articles/PMC9457620/ /pubmed/36080444 http://dx.doi.org/10.3390/molecules27175676 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Abdelbasset, Walid Kamal
Elsayed, Shereen H.
Alshehri, Sameer
Huwaimel, Bader
Alobaida, Ahmed
Alsubaiyel, Amal M.
Alqahtani, Abdulsalam A.
El Hamd, Mohamed A.
Venkatesan, Kumar
AboRas, Kareem M.
Abourehab, Mohammed A. S.
Development of GBRT Model as a Novel and Robust Mathematical Model to Predict and Optimize the Solubility of Decitabine as an Anti-Cancer Drug
title Development of GBRT Model as a Novel and Robust Mathematical Model to Predict and Optimize the Solubility of Decitabine as an Anti-Cancer Drug
title_full Development of GBRT Model as a Novel and Robust Mathematical Model to Predict and Optimize the Solubility of Decitabine as an Anti-Cancer Drug
title_fullStr Development of GBRT Model as a Novel and Robust Mathematical Model to Predict and Optimize the Solubility of Decitabine as an Anti-Cancer Drug
title_full_unstemmed Development of GBRT Model as a Novel and Robust Mathematical Model to Predict and Optimize the Solubility of Decitabine as an Anti-Cancer Drug
title_short Development of GBRT Model as a Novel and Robust Mathematical Model to Predict and Optimize the Solubility of Decitabine as an Anti-Cancer Drug
title_sort development of gbrt model as a novel and robust mathematical model to predict and optimize the solubility of decitabine as an anti-cancer drug
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9457620/
https://www.ncbi.nlm.nih.gov/pubmed/36080444
http://dx.doi.org/10.3390/molecules27175676
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