Cargando…
In Vitro Evaluation of In Silico Screening Approaches in Search for Selective ACE2 Binding Chemical Probes
New models for ACE2 receptor binding, based on QSAR and docking algorithms were developed, using XRD structural data and ChEMBL 26 database hits as training sets. The selectivity of the potential ACE2-binding ligands towards Neprilysin (NEP) and ACE was evaluated. The Enamine screening collection (3...
Autores principales: | , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9458095/ https://www.ncbi.nlm.nih.gov/pubmed/36080168 http://dx.doi.org/10.3390/molecules27175400 |
_version_ | 1784786217620996096 |
---|---|
author | Rayevsky, Alexey V. Poturai, Andrii S. Kravets, Iryna O. Pashenko, Alexander E. Borisova, Tatiana A. Tolstanova, Ganna M. Volochnyuk, Dmitriy M. Borysko, Petro O. Vadzyuk, Olga B. Alieksieieva, Diana O. Zabolotna, Yuliana Klimchuk, Olga Horvath, Dragos Marcou, Gilles Ryabukhin, Sergey V. Varnek, Alexandre |
author_facet | Rayevsky, Alexey V. Poturai, Andrii S. Kravets, Iryna O. Pashenko, Alexander E. Borisova, Tatiana A. Tolstanova, Ganna M. Volochnyuk, Dmitriy M. Borysko, Petro O. Vadzyuk, Olga B. Alieksieieva, Diana O. Zabolotna, Yuliana Klimchuk, Olga Horvath, Dragos Marcou, Gilles Ryabukhin, Sergey V. Varnek, Alexandre |
author_sort | Rayevsky, Alexey V. |
collection | PubMed |
description | New models for ACE2 receptor binding, based on QSAR and docking algorithms were developed, using XRD structural data and ChEMBL 26 database hits as training sets. The selectivity of the potential ACE2-binding ligands towards Neprilysin (NEP) and ACE was evaluated. The Enamine screening collection (3.2 million compounds) was virtually screened according to the above models, in order to find possible ACE2-chemical probes, useful for the study of SARS-CoV2-induced neurological disorders. An enzymology inhibition assay for ACE2 was optimized, and the combined diversified set of predicted selective ACE2-binding molecules from QSAR modeling, docking, and ultrafast docking was screened in vitro. The in vitro hits included two novel chemotypes suitable for further optimization. |
format | Online Article Text |
id | pubmed-9458095 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-94580952022-09-09 In Vitro Evaluation of In Silico Screening Approaches in Search for Selective ACE2 Binding Chemical Probes Rayevsky, Alexey V. Poturai, Andrii S. Kravets, Iryna O. Pashenko, Alexander E. Borisova, Tatiana A. Tolstanova, Ganna M. Volochnyuk, Dmitriy M. Borysko, Petro O. Vadzyuk, Olga B. Alieksieieva, Diana O. Zabolotna, Yuliana Klimchuk, Olga Horvath, Dragos Marcou, Gilles Ryabukhin, Sergey V. Varnek, Alexandre Molecules Article New models for ACE2 receptor binding, based on QSAR and docking algorithms were developed, using XRD structural data and ChEMBL 26 database hits as training sets. The selectivity of the potential ACE2-binding ligands towards Neprilysin (NEP) and ACE was evaluated. The Enamine screening collection (3.2 million compounds) was virtually screened according to the above models, in order to find possible ACE2-chemical probes, useful for the study of SARS-CoV2-induced neurological disorders. An enzymology inhibition assay for ACE2 was optimized, and the combined diversified set of predicted selective ACE2-binding molecules from QSAR modeling, docking, and ultrafast docking was screened in vitro. The in vitro hits included two novel chemotypes suitable for further optimization. MDPI 2022-08-24 /pmc/articles/PMC9458095/ /pubmed/36080168 http://dx.doi.org/10.3390/molecules27175400 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Rayevsky, Alexey V. Poturai, Andrii S. Kravets, Iryna O. Pashenko, Alexander E. Borisova, Tatiana A. Tolstanova, Ganna M. Volochnyuk, Dmitriy M. Borysko, Petro O. Vadzyuk, Olga B. Alieksieieva, Diana O. Zabolotna, Yuliana Klimchuk, Olga Horvath, Dragos Marcou, Gilles Ryabukhin, Sergey V. Varnek, Alexandre In Vitro Evaluation of In Silico Screening Approaches in Search for Selective ACE2 Binding Chemical Probes |
title | In Vitro Evaluation of In Silico Screening Approaches in Search for Selective ACE2 Binding Chemical Probes |
title_full | In Vitro Evaluation of In Silico Screening Approaches in Search for Selective ACE2 Binding Chemical Probes |
title_fullStr | In Vitro Evaluation of In Silico Screening Approaches in Search for Selective ACE2 Binding Chemical Probes |
title_full_unstemmed | In Vitro Evaluation of In Silico Screening Approaches in Search for Selective ACE2 Binding Chemical Probes |
title_short | In Vitro Evaluation of In Silico Screening Approaches in Search for Selective ACE2 Binding Chemical Probes |
title_sort | in vitro evaluation of in silico screening approaches in search for selective ace2 binding chemical probes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9458095/ https://www.ncbi.nlm.nih.gov/pubmed/36080168 http://dx.doi.org/10.3390/molecules27175400 |
work_keys_str_mv | AT rayevskyalexeyv invitroevaluationofinsilicoscreeningapproachesinsearchforselectiveace2bindingchemicalprobes AT poturaiandriis invitroevaluationofinsilicoscreeningapproachesinsearchforselectiveace2bindingchemicalprobes AT kravetsirynao invitroevaluationofinsilicoscreeningapproachesinsearchforselectiveace2bindingchemicalprobes AT pashenkoalexandere invitroevaluationofinsilicoscreeningapproachesinsearchforselectiveace2bindingchemicalprobes AT borisovatatianaa invitroevaluationofinsilicoscreeningapproachesinsearchforselectiveace2bindingchemicalprobes AT tolstanovagannam invitroevaluationofinsilicoscreeningapproachesinsearchforselectiveace2bindingchemicalprobes AT volochnyukdmitriym invitroevaluationofinsilicoscreeningapproachesinsearchforselectiveace2bindingchemicalprobes AT boryskopetroo invitroevaluationofinsilicoscreeningapproachesinsearchforselectiveace2bindingchemicalprobes AT vadzyukolgab invitroevaluationofinsilicoscreeningapproachesinsearchforselectiveace2bindingchemicalprobes AT alieksieievadianao invitroevaluationofinsilicoscreeningapproachesinsearchforselectiveace2bindingchemicalprobes AT zabolotnayuliana invitroevaluationofinsilicoscreeningapproachesinsearchforselectiveace2bindingchemicalprobes AT klimchukolga invitroevaluationofinsilicoscreeningapproachesinsearchforselectiveace2bindingchemicalprobes AT horvathdragos invitroevaluationofinsilicoscreeningapproachesinsearchforselectiveace2bindingchemicalprobes AT marcougilles invitroevaluationofinsilicoscreeningapproachesinsearchforselectiveace2bindingchemicalprobes AT ryabukhinsergeyv invitroevaluationofinsilicoscreeningapproachesinsearchforselectiveace2bindingchemicalprobes AT varnekalexandre invitroevaluationofinsilicoscreeningapproachesinsearchforselectiveace2bindingchemicalprobes |